DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Arl16

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_003751033.1 Gene:Arl16 / 688311 RGDID:1590059 Length:173 Species:Rattus norvegicus


Alignment Length:168 Identity:54/168 - (32%)
Similarity:88/168 - (52%) Gaps:16/168 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LILGLDGAGKTTILYRLQ----------VGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIR 74
            |:||..|.|||.::.|||          :||...|.||:|.|:..:. .:.|..:.:|||..|  
  Rat     3 LLLGAAGVGKTLLVKRLQKLSSGDGKGDLGEPPPTRPTVGTNLTDIV-AHRKITIRELGGCMS-- 64

  Fly    75 PYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVH 139
            |.|..||.|..::::::|:::..::..|..:||.:|..||||.|.:::|.||.|:...|||.|:.
  Rat    65 PIWSSYYGNCHSLLFMMDASNPTQLSASCMQLLGLLSAEELAKASVLILFNKIDLPSYMTVEEIK 129

  Fly   140 HALGLENL---KNRTFQIFKTSATKGEGLDQAMDWLSN 174
            ..:.|.::   ..:.....:.||..|.||...:.||.|
  Rat   130 SLMRLPDIIACAKQNITTVEISARNGTGLATVLLWLRN 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 54/168 (32%)
Arl16XP_003751033.1 Arf_Arl 1..168 CDD:206644 54/168 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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