DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Arl13b

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_080853.3 Gene:Arl13b / 68146 MGIID:1915396 Length:427 Species:Mus musculus


Alignment Length:169 Identity:60/169 - (35%)
Similarity:95/169 - (56%) Gaps:13/169 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV--WDLGGQTSIRPYW 77
            |::.::::|||.||||.....:|........||:||:  ::..:..||||  :||||...||..|
Mouse    20 RKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFS--KIDLRQGKFQVTIFDLGGGKRIRGIW 82

  Fly    78 RCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHAL 142
            :.||:.:..:|:||||:|.:|:..:|:.:..:||...::|..::|||||||.:|.:..|:|...|
Mouse    83 KNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECL 147

  Fly   143 GLENLKNR---TFQIFKTSATKGEG------LDQAMDWL 172
            .||.|.|.   ..||...||..|.|      :.:.:.||
Mouse   148 SLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 59/166 (36%)
Arl13bNP_080853.3 Arl2l1_Arl13_like 23..189 CDD:133361 59/166 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 207..250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..427
Blue background indicates that the domain is not in the aligned region.

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