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Protein Alignment Arl1 and Arl2
DIOPT Version :9
Sequence 1: | NP_524098.2 |
Gene: | Arl1 / 39745 |
FlyBaseID: | FBgn0000115 |
Length: | 180 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006230961.1 |
Gene: | Arl2 / 65142 |
RGDID: | 69326 |
Length: | 210 |
Species: | Rattus norvegicus |
Alignment Length: | 191 |
Identity: | 75/191 - (39%) |
Similarity: | 112/191 - (58%) |
Gaps: | 26/191 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRC 79
||:|:|:||||.|||||||.:....:|.|..||:|||::.:.::..|..:||:|||.|:|.|||.
Rat 15 RELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRN 79
Fly 80 YYSNTDAIIYVVDSADRDRIGISKDELLYMLRE--------------------------EELAGA 118
|:.:||.:|:|||||||.|:...:.||..:|.| |.||||
Rat 80 YFESTDGLIWVVDSADRQRMQDCQRELQSLLVEEVCPVLTGSQATACHKCHGLLGHSGRERLAGA 144
Fly 119 ILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
.|::.|||||:.|.::...:..||.|:::::..::|...||..||.|...:|||.:.:.||
Rat 145 TLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 205
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Arl1 | NP_524098.2 |
Arl1 |
18..175 |
CDD:206718 |
71/182 (39%) |
Arl2 | XP_006230961.1 |
Arl2 |
3..201 |
CDD:206720 |
73/185 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271528at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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