DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arf4

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001025648.1 Gene:arf4 / 595036 XenbaseID:XB-GENE-484079 Length:180 Species:Xenopus tropicalis


Alignment Length:176 Identity:100/176 - (56%)
Similarity:132/176 - (75%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLG 68
            :.|.|..|.|.::||||::|||.||||||||:|::||:||||||||||||.|.|||:.|.|||:|
 Frog     5 ISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVG 69

  Fly    69 GQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCM 133
            ||..|||.||.|:.||..:|:||||.||:||..:.:||..||:|:||..|:|:|.|||||:...|
 Frog    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEAAEELQKMLQEDELRDAVLLVFANKQDLPNAM 134

  Fly   134 TVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
            .::|:...|||:||:|||:.:..|.||:|.||.:.:|||||.|..|
 Frog   135 AISEMTDKLGLQNLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 92/156 (59%)
arf4NP_001025648.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 99/174 (57%)

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