DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and sar1b

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001019548.1 Gene:sar1b / 554177 ZFINID:ZDB-GENE-040426-1958 Length:198 Species:Danio rerio


Alignment Length:178 Identity:51/178 - (28%)
Similarity:87/178 - (48%) Gaps:13/178 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 72
            |.||. .:..:::.||||.|||||:|:.|:...:...:||:....|::|...:.|..:||||...
Zfish    18 FLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHAQ 81

  Fly    73 IRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAE 137
            .|..|:.|....:.|:::||..|..|:..||.||..::.:|.:....:::|.||.|....::..:
Zfish    82 ARRVWKNYLPAINGIVFLVDCIDHGRLAESKTELDALMTDETIGNVPILILGNKIDKPEAISEEK 146

  Fly   138 VHHALG------------LENLKNRTFQIFKTSATKGEGLDQAMDWLS 173
            :....|            |:.|..|..::|..|..|.:|..:...|||
Zfish   147 LREIFGLYGQTTGKGNIPLKELNTRPLEVFMCSVLKRQGYGEGFRWLS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 48/168 (29%)
sar1bNP_001019548.1 Sar1 3..197 CDD:206645 51/178 (29%)

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