DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl3a

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_068068946.1 Gene:arl3a / 550525 ZFINID:ZDB-GENE-050417-368 Length:198 Species:Danio rerio


Alignment Length:180 Identity:77/180 - (42%)
Similarity:112/180 - (62%) Gaps:2/180 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVLSYFRGLLGS--REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW 65
            |:||..|.|..:  :|:|||:||||..||||:|.:|...::....||.|||::.|..:..|..||
Zfish    18 GLLSILRKLKSAPDQEVRILLLGLDNGGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVW 82

  Fly    66 DLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMD 130
            |:|||..||||||.|:.|||.:|||:|||||.|...:..||..:|.||:|:|..:::.|||||:.
Zfish    83 DIGGQRKIRPYWRNYFENTDMLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLL 147

  Fly   131 GCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            .....:|:...|.|..:::|.:||...||..|||:...|.|:...:.::|
Zfish   148 TAAPASEIAEGLNLHIIRDRMWQIQSCSALTGEGVQDGMSWVCKNVTAKK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 70/156 (45%)
arl3aXP_068068946.1 Arl3 19..192 CDD:206721 75/172 (44%)

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