DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and zgc:110286

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001017602.1 Gene:zgc:110286 / 550265 ZFINID:ZDB-GENE-050417-68 Length:181 Species:Danio rerio


Alignment Length:181 Identity:91/181 - (50%)
Similarity:125/181 - (69%) Gaps:2/181 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLS--YFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQ 63
            ||...|  :.|...|.:::|::::|||.|||||:||:|::||||:||||||||||.|.|||:.|.
Zfish     1 MGNFFSQLFSRLFEGKKQIRLVMVGLDAAGKTTVLYKLKLGEVVSTIPTIGFNVETVEYKNISFT 65

  Fly    64 VWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQD 128
            |||:||||.||..|:.||..:..:|:||||:|.:||..:.:||..||.|:|:..|:|:|||||||
Zfish    66 VWDVGGQTKIRGLWKYYYQYSQGLIFVVDSSDHERIETAAEELNAMLAEDEMRDAVLLVLANKQD 130

  Fly   129 MDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
            :...|.|.|:...|||..|..|.:.:..|.|.:|.||.:.:|||||.|..|
Zfish   131 LPKAMPVHELTDRLGLRALTGRQWFVQSTCAVQGSGLYEGLDWLSNQLYKR 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 83/156 (53%)
zgc:110286NP_001017602.1 P-loop_NTPase 1..181 CDD:304359 90/179 (50%)
SAR 3..175 CDD:197556 84/171 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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