DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and sar1b

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001015871.1 Gene:sar1b / 548588 XenbaseID:XB-GENE-944209 Length:198 Species:Xenopus tropicalis


Alignment Length:183 Identity:59/183 - (32%)
Similarity:95/183 - (51%) Gaps:14/183 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDL 67
            |||. |.||. .:..:::.||||.|||||:|..|:.|.:...:||:....|::|...:.|..:||
 Frog    14 GVLQ-FLGLY-KKTGKLVFLGLDNAGKTTLLQMLKDGRMGQYVPTLHPTSEELTIAGMTFTTFDL 76

  Fly    68 GGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGC 132
            ||.|..|..|:.|....:.|::::|.||.||:..||.||..::.:|.:|...:::|.||.|....
 Frog    77 GGHTQARRVWKNYLPAINGIVFLIDCADHDRLSESKRELDALMADETIANVPILLLGNKIDRPEA 141

  Fly   133 MTVAEVHHALGL------------ENLKNRTFQIFKTSATKGEGLDQAMDWLS 173
            ::...:.|..|:            :.|.||..::|..|..|.:|..:...|||
 Frog   142 ISEERLLHLFGIYGQTTGKGKVPQKQLANRPLEVFMCSILKRQGYGEGFRWLS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 53/168 (32%)
sar1bNP_001015871.1 Sar1 3..197 CDD:206645 59/183 (32%)

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