DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl5b

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001006744.1 Gene:arl5b / 448415 XenbaseID:XB-GENE-996906 Length:179 Species:Xenopus tropicalis


Alignment Length:173 Identity:79/173 - (45%)
Similarity:116/173 - (67%) Gaps:0/173 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW 65
            ||.:.:.......::|.:::|:|||.|||||:||:..:.|||.|.||||.|||::..||..|.:|
 Frog     1 MGLIFAKLWNFFCNQEHKVIIVGLDNAGKTTLLYQFLMNEVVHTSPTIGSNVEEIVVKNTHFLMW 65

  Fly    66 DLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMD 130
            |:|||.|:|..|..|||||:.||.||||.||:|:.|:|:||..||..|:|..|.:::.|||||:.
 Frog    66 DIGGQESLRSSWNTYYSNTEFIILVVDSTDRERLSITKEELYRMLAHEDLRKAAVLIFANKQDIK 130

  Fly   131 GCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLS 173
            |||:.|::...|.|.::|:..:.|....|..||||.|.::|::
 Frog   131 GCMSAADISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMT 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 76/156 (49%)
arl5bNP_001006744.1 Arl5_Arl8 3..175 CDD:133353 77/171 (45%)

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