DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arf4a

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001003590.1 Gene:arf4a / 445196 ZFINID:ZDB-GENE-040801-109 Length:180 Species:Danio rerio


Alignment Length:176 Identity:96/176 - (54%)
Similarity:129/176 - (73%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLG 68
            :.|.|..|.|.::||||::|||.||||||||:|::||:||||||||||||.|.|||:.|.|||:|
Zfish     5 ISSVFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVG 69

  Fly    69 GQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCM 133
            ||..|||.||.|:.||..:|:||||.||:|...|.:||..||:|:||..|:|::.|||||:...|
Zfish    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERAQESAEELQKMLQEDELRDAVLLIFANKQDLPNAM 134

  Fly   134 TVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
            .::|:...|||:||::||:.:....||:|.||.:.:||||..|..|
Zfish   135 PISELTDKLGLQNLRSRTWYVQAACATQGTGLYEGLDWLSEQLSKR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 89/156 (57%)
arf4aNP_001003590.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 95/174 (55%)

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