DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl1

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001002473.1 Gene:arl1 / 436746 ZFINID:ZDB-GENE-040718-175 Length:181 Species:Danio rerio


Alignment Length:181 Identity:143/181 - (79%)
Similarity:157/181 - (86%) Gaps:1/181 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVL-SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV 64
            |||.. |.|.||.|:|||||||||||||||||||||||||||||||||||||||.||||||||||
Zfish     1 MGGFFSSLFSGLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQV 65

  Fly    65 WDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDM 129
            ||||||||||||||||||||||:||||||:||||:||||.||:.||.||||..|||||.||||||
Zfish    66 WDLGGQTSIRPYWRCYYSNTDAVIYVVDSSDRDRMGISKSELVAMLEEEELKKAILVVFANKQDM 130

  Fly   130 DGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            :..||..||.:||||..||:|.:||||||||||.|||:||:||..:|:||:
Zfish   131 EQAMTPTEVANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVESLKSRQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 129/156 (83%)
arl1NP_001002473.1 Arl1 19..175 CDD:206718 129/155 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595024
Domainoid 1 1.000 274 1.000 Domainoid score I1746
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20319
Inparanoid 1 1.050 280 1.000 Inparanoid score I2881
OMA 1 1.010 - - QHG53833
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 1 1.000 - - FOG0004738
OrthoInspector 1 1.000 - - oto40914
orthoMCL 1 0.900 - - OOG6_103249
Panther 1 1.100 - - LDO PTHR11711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2405
SonicParanoid 1 1.000 - - X3333
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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