DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Arl8

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001287225.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster


Alignment Length:179 Identity:58/179 - (32%)
Similarity:104/179 - (58%) Gaps:3/179 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVV-TTIPTIGFNVEQVTYKNLKFQVWDL 67
            :|.:|:.:....||.:.::||..:||||.:..:..|:.. ..|||:|||:.::|..|:..:|||:
  Fly     8 ILEWFKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDI 72

  Fly    68 GGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGC 132
            |||...|..|..|....:||:|:||:||.|::..|::||..:|.:.:|||..::||.||:|:.|.
  Fly    73 GGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGA 137

  Fly   133 MTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWL--SNTLQSR 179
            :....:...:.|.::::|....:..|..:.:.:|..:.||  .:..|||
  Fly   138 LDETGLIERMNLSSIQDREICCYSISCKEKDNIDITLQWLIQHSKSQSR 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 51/159 (32%)
Arl8NP_001287225.1 Arl10_like 22..180 CDD:206724 51/157 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455891
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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