DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl4cb

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_998413.1 Gene:arl4cb / 406531 ZFINID:ZDB-GENE-040426-2382 Length:192 Species:Danio rerio


Alignment Length:179 Identity:76/179 - (42%)
Similarity:106/179 - (59%) Gaps:6/179 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQV-----TYKNLKFQVWDL 67
            |..:...:.:.|::||||.|||||:||||:..|.|.|:||||||.|::     |.|.:....||:
Zfish     5 FSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDV 69

  Fly    68 GGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGC 132
            |||..:||.|:.|...||.|||||||.|.||:..:|.||..:.:..|..|..|:|:|||||:...
Zfish    70 GGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKS 134

  Fly   133 MTVAEVHHALGLENL-KNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            ::||::...|.|:.| ...|:.|....|..||||.:.||.|...:..|:
Zfish   135 LSVADIEKQLALQELTPATTYHIQPACAIIGEGLHEGMDKLYEMIVKRR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 74/162 (46%)
arl4cbNP_998413.1 Arl4_Arl7 11..192 CDD:206719 75/173 (43%)

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