DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arf1

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_989018.1 Gene:arf1 / 394614 XenbaseID:XB-GENE-950251 Length:181 Species:Xenopus tropicalis


Alignment Length:181 Identity:102/181 - (56%)
Similarity:136/181 - (75%) Gaps:1/181 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVL-SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV 64
            ||.|. :.|:||.|.:|||||::|||.||||||||:|::||:||||||||||||.|.|||:.|.|
 Frog     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65

  Fly    65 WDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDM 129
            ||:|||..|||.||.|:.||..:|:||||.||:|:..:::||:.||.|:||..|:|:|.|||||:
 Frog    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDL 130

  Fly   130 DGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            ...|..||:...|||.:|::|.:.|..|.||.|:||.:.:|||||.|::.|
 Frog   131 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNHK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 90/156 (58%)
arf1NP_989018.1 ARF 5..179 CDD:128474 98/173 (57%)

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