DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl8a

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_988990.1 Gene:arl8a / 394587 XenbaseID:XB-GENE-866659 Length:186 Species:Xenopus tropicalis


Alignment Length:178 Identity:59/178 - (33%)
Similarity:103/178 - (57%) Gaps:1/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEV-VTTIPTIGFNVEQVTYKNLKFQVWDL 67
            :|.:|:.|....||.:.::||..:||||.:..:..|:. ...|||:|||:.::|..|:..::||:
 Frog     8 LLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDI 72

  Fly    68 GGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGC 132
            |||...|..|..|.....||:|:||:||:|:|..||:||..:|.:.:|.|..::||.||:|:.|.
 Frog    73 GGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGA 137

  Fly   133 MTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            :...|:...:.|..:::|....:..|..:.:.:|..:.||....:||:
 Frog   138 LDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRR 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 52/157 (33%)
arl8aNP_988990.1 Arl10_like 22..180 CDD:206724 52/157 (33%)

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