DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl1 and arl3l2

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_957013.1 Gene:arl3l2 / 393692 ZFINID:ZDB-GENE-040426-1678 Length:187 Species:Danio rerio


Alignment Length:180 Identity:79/180 - (43%)
Similarity:112/180 - (62%) Gaps:2/180 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVLSYFRGLLGSR--EMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW 65
            |:||..:.|.||.  |:|||:||||.|||||:|..|...:|.|..||.|||::.|..:.:|..||
Zfish     7 GLLSVMQKLKGSSELELRILLLGLDNAGKTTLLKSLASEDVNTITPTQGFNIKTVASRGMKLNVW 71

  Fly    66 DLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMD 130
            |:|||..|||:|:.|..|||.::||:||||:.|...:..||..::.||.|.|..:::.|||||:.
Zfish    72 DIGGQRKIRPFWKKYLENTDLLVYVIDSADKKRFEETGLELSELIDEENLCGVPVLIFANKQDLG 136

  Fly   131 GCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            .....:|:...|.|...::|.:||...||..|||:...|:|:.|.|.:||
Zfish   137 TAAPASEIAEGLNLHTYRDRVWQIQACSAITGEGVQDGMNWICNNLVNRK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 68/156 (44%)
arl3l2NP_957013.1 Arl3 8..181 CDD:206721 74/172 (43%)

Return to query results.
Submit another query.