DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl4ab

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:191 Identity:73/191 - (38%)
Similarity:107/191 - (56%) Gaps:11/191 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLS----YFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTY---- 57
            ||..||    .|..|...:.:.|:|||||.|||||:||||:..|.|.|:||.|||.|::..    
Zfish     1 MGNGLSEPHFIFPCLPSFQALHIVILGLDCAGKTTVLYRLRFNEFVNTVPTKGFNTEKIKVNLGP 65

  Fly    58 --KNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAIL 120
              :...|..||:|||..:||.||.|....|.:::||||.|.:|:..:|.||..:.|.:|..|..:
Zfish    66 KSRTATFHFWDVGGQEKLRPLWRSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQENLGVPV 130

  Fly   121 VVLANKQDMDGCMTVAEVHHALGLENLKNRT-FQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            :|:|||||:...:.::||...|.|..|.:.| :.:....|..||||.:.::.|...:..|:
Zfish   131 LVVANKQDLRSALPLSEVEQMLALNELGSHTPWHLQPACAIIGEGLQEGLERLHTMIIKRR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 66/163 (40%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 67/174 (39%)

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