DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arf2b

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_958888.1 Gene:arf2b / 327026 ZFINID:ZDB-GENE-030131-5234 Length:181 Species:Danio rerio


Alignment Length:181 Identity:102/181 - (56%)
Similarity:135/181 - (74%) Gaps:1/181 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVL-SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV 64
            ||.|. :.|:||.|.:|||||::|||.||||||||:|::||:||||||||||||.|.|||:.|.|
Zfish     1 MGNVFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65

  Fly    65 WDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDM 129
            ||:|||..|||.||.|:.||..:|:||||.||:|:..:::||..||.|:||..|:|:|.|||||:
Zfish    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFANKQDL 130

  Fly   130 DGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            ...|..||:...|||..|::|.:.|..|.||.|:||.:.:|||||.|:::|
Zfish   131 PNAMNAAEITDKLGLHALRHRNWYIQATCATSGDGLYEGLDWLSNQLKNQK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 90/156 (58%)
arf2bNP_958888.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 98/173 (57%)

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