DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl4d

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_955938.1 Gene:arl4d / 323573 ZFINID:ZDB-GENE-030131-2293 Length:200 Species:Danio rerio


Alignment Length:172 Identity:64/172 - (37%)
Similarity:103/172 - (59%) Gaps:6/172 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTY-----KNLKFQVWDLGGQTSIR 74
            :.:.::::|||.:|||::||||::.|.|.||||.|||.|::..     :.:.||.||:|||..:|
Zfish    19 QSLHVVVIGLDSSGKTSLLYRLKLKEFVETIPTKGFNTEKIKVPVGNGRAITFQAWDVGGQEKLR 83

  Fly    75 PYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVH 139
            |.|:.|...||.:::||||.:.:|:..:|.||..:.|..|..|..::|||||||:...:.|::|.
Zfish    84 PLWKSYTRRTDGMVFVVDSTEVERMEEAKVELHKITRTSENQGVPVLVLANKQDLPVALPVSDVE 148

  Fly   140 HALGLENLKNRTF-QIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            ..|.:..|...|. .:...||..|:||...::.|.:.:..||
Zfish   149 KVLAVHELSASTLHHVQGCSAVDGQGLQLGLEKLYDMILKRK 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 62/162 (38%)
arl4dNP_955938.1 Arl4_Arl7 18..200 CDD:206719 64/172 (37%)

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