DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and CG11356

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster


Alignment Length:172 Identity:44/172 - (25%)
Similarity:85/172 - (49%) Gaps:9/172 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EMRILILGLDGAGKTTILYRL-----QVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRP 75
            |.::||||..|:|||.:.:||     ...:...|.....:.::.......:.|:.::||...::.
  Fly    30 EFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVGGNVEMQR 94

  Fly    76 YWRCYYSNTDAIIYVVD-SADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVH 139
            .|:.||:::.|:||..| .||...:..:...|...|...:|||..::::|::..:.  :.:.:|.
  Fly    95 LWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRVG--VQLYDVE 157

  Fly   140 HALGLENL-KNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            :|.|||.| |:....:......:.|.|.:.:.||.:.|.:||
  Fly   158 YAFGLEELAKSCDCPLLICHMDETEDLHRGIRWLCHQLMARK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 40/163 (25%)
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 40/163 (25%)

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