DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Arfrp1

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster


Alignment Length:174 Identity:61/174 - (35%)
Similarity:92/174 - (52%) Gaps:20/174 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ILILGLDGAGKTTIL----------YR-LQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 72
            ::|||||.|||||.|          |: |...::.|   |:|.|:..:..:.::...||||||..
  Fly    20 VVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKITT---TVGLNIGTIDVQGVRLNFWDLGGQQE 81

  Fly    73 IRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAE 137
            ::..|..||..:..:|||:||.||:|:..||.....|::.|.|:|..|::||||||:...|.|.|
  Fly    82 LQSLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVRE 146

  Fly   138 V----HHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQ 177
            :    ..|..|  :..|.......||..|||:|:.:.||...::
  Fly   147 IKPVFQQAGAL--IGRRDCLTIPVSALHGEGVDEGIKWLVEAIK 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 61/170 (36%)
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 61/170 (36%)

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