DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl1 and Arl10

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001386250.1 Gene:Arl10 / 306767 RGDID:1303298 Length:243 Species:Rattus norvegicus


Alignment Length:161 Identity:55/161 - (34%)
Similarity:97/161 - (60%) Gaps:11/161 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LGSREMRILILGLDGAGKTTILYRLQVGE--VVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIR 74
            |..||  :|:|||||:||:|.| |:..|:  |...:||.|||..::..||.:..:.::||..::|
  Rat    74 LEQRE--VLVLGLDGSGKSTFL-RMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGGSQNLR 135

  Fly    75 PYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYML-REEELAGAILVVLANKQDMDGCMTVAEV 138
            .||:.:.:..|.::::|||.||.|:..::.||..:| ::.:|.   :|::|||||:.|.|::.|:
  Rat   136 FYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDKDPDLP---VVIVANKQDLSGAMSMVEL 197

  Fly   139 HHALGL--ENLKNRTFQIFKTSATKGEGLDQ 167
            ...|||  .:.:...|.:..:.|..|.|.::
  Rat   198 QQELGLLASDNQREVFLLAASIAPAGSGFEE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 52/155 (34%)
Arl10NP_001386250.1 P-loop containing Nucleoside Triphosphate Hydrolases 78..236 CDD:476819 53/157 (34%)

Return to query results.
Submit another query.