DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Arl9

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_017454588.1 Gene:Arl9 / 289565 RGDID:1303337 Length:780 Species:Rattus norvegicus


Alignment Length:162 Identity:56/162 - (34%)
Similarity:89/162 - (54%) Gaps:5/162 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVLSYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEV-VTTIPTIGFNVEQVTYKNLKFQVWD 66
            |...:.||....:..:||:|||||||||::|:.|....| .:|.||:|||...::.::.:.:..:
  Rat   598 GFCLWMRGCAKVKNKQILVLGLDGAGKTSVLHFLASNTVRHSTAPTLGFNAVNISSEDRQMEFLE 662

  Fly    67 LGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQ-DMD 130
            :||....|.||..|......:|:||||||..|:..:|..|..::  :......|||.|||| |::
  Rat   663 IGGSEPFRSYWDMYLPKGWLLIFVVDSADHKRLPEAKKYLHQLI--DPNPDLPLVVFANKQKDLE 725

  Fly   131 GCMTVAEVHHALGLENLKN-RTFQIFKTSATK 161
            ....:.::|.||.|.::.| |...:|.|..|:
  Rat   726 AAYRITDIHDALALSDVGNDRKLFLFGTQVTR 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 53/147 (36%)
Arl9XP_017454588.1 PTZ00121 <106..519 CDD:173412
P-loop containing Nucleoside Triphosphate Hydrolases 613..778 CDD:476819 53/147 (36%)
Blue background indicates that the domain is not in the aligned region.

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