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Protein Alignment Arl1 and Sar1a

DIOPT Version :10

Sequence 1:	NP_524098.2	Gene:	Arl1 / 39745	FlyBaseID:	FBgn0000115	Length:	180	Species:	Drosophila melanogaster
Sequence 2:	NP_033146.1	Gene:	Sar1a / 20224	MGIID:	98230	Length:	198	Species:	Mus musculus

Alignment Length:	178	Identity:	52/178 - (29%)
Similarity:	89/178 - (50%)	Gaps:	13/178 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 FRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTS 72
            |.||. .:..:::.||||.|||||:|:.|:...:...:||:....|::|...:.|..:||||...
Mouse    18 FLGLY-KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQ 81

  Fly    73 IRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAE 137
            .|..|:.|....:.|:::||.||..|:..||.||..::.:|.::...:::|.||.|....::..:
Mouse    82 ARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEK 146

  Fly   138 VHHALG------------LENLKNRTFQIFKTSATKGEGLDQAMDWLS 173
            :....|            |:.|..|..::|..|..|.:|..:...|||
Mouse   147 LREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.