DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl1 and arl-6

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_497993.1 Gene:arl-6 / 183311 WormBaseID:WBGene00000193 Length:190 Species:Caenorhabditis elegans


Alignment Length:189 Identity:68/189 - (35%)
Similarity:115/189 - (60%) Gaps:13/189 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSYFRGL-----LGSREMRILILGLDGAGKTTILYRLQVGEVVT--TIPTIGFNVEQVTYKNLKF 62
            :.:|..|     ||.:::.|:::|||.:||||||.:|:..|..:  .:||:|..|...:.:||.|
 Worm     1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSF 65

  Fly    63 QVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELA--GAILVVLAN 125
            ..:|:.||...|..|..|:.::..:|:|:||:||.|:.:.||||:.::..:::.  |..:|:|||
 Worm    66 HAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILAN 130

  Fly   126 KQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLS----NTLQSRK 180
            |.|:.|.||.:::..||||...::.|:.|..|.|..|:|||:||..||    ..::||:
 Worm   131 KMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEITKYMESRR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 62/164 (38%)
arl-6NP_497993.1 Arl6 19..180 CDD:206722 62/160 (39%)

Return to query results.
Submit another query.