DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and sar-1

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_500582.1 Gene:sar-1 / 177217 WormBaseID:WBGene00022678 Length:193 Species:Caenorhabditis elegans


Alignment Length:193 Identity:52/193 - (26%)
Similarity:104/193 - (53%) Gaps:17/193 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLSYFRGL-----LGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNL 60
            |..:..:|.|:     |.:::.:::.||||.|||||:|:.|:...:...:||:....||::...:
 Worm     1 MSFLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGI 65

  Fly    61 KFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLAN 125
            .|..:||||....|..|:.|:...||:::::|.||.:|:..|:.||..:|::|::|...:::|.|
 Worm    66 SFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGN 130

  Fly   126 KQDMDGCMTVAEVHHALGLEN------------LKNRTFQIFKTSATKGEGLDQAMDWLSNTL 176
            |.|..|.::..::...|.:::            :.:|..::|..|..:.:|..:.:.||...|
 Worm   131 KIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 47/168 (28%)
sar-1NP_500582.1 Sar1 3..193 CDD:206645 50/189 (26%)

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