DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Y54E10BR.2

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_491094.1 Gene:Y54E10BR.2 / 171878 WormBaseID:WBGene00021841 Length:191 Species:Caenorhabditis elegans


Alignment Length:175 Identity:52/175 - (29%)
Similarity:86/175 - (49%) Gaps:13/175 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILILGLDGAGKTTIL----------YRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGG 69
            ::..::|:|||.|||||.|          |.:.....:|.  |:|.|...|...|.....|||||
 Worm    16 KDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITA--TVGLNTGNVELNNTCLHFWDLGG 78

  Fly    70 QTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMT 134
            |.|:|..|..||.:.:|:|:|||:...|...|...:...::..|.:....::|..||.:|:|...
 Worm    79 QESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVLVAVNKSEMEGAAA 143

  Fly   135 VAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179
            .|||...|..:|.:: ...:...||.:|..:::.:.|:..:|.|:
 Worm   144 AAEVRMLLEDDNHRS-DLAVLPVSALEGTNIERCVHWIVRSLASQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 50/166 (30%)
Y54E10BR.2NP_491094.1 Arfrp1 19..183 CDD:206725 50/166 (30%)

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