DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and Arl4a

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_031513.1 Gene:Arl4a / 11861 MGIID:99437 Length:200 Species:Mus musculus


Alignment Length:190 Identity:73/190 - (38%)
Similarity:111/190 - (58%) Gaps:10/190 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVLSYFRGLLGS----REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQV-----T 56
            ||..||....:|.|    :...|:|||||.|||||:|||||..|.|.|:||.|||.|::     .
Mouse     1 MGNGLSDQTSILSSLPSFQSFHIVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGN 65

  Fly    57 YKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILV 121
            .|.:.|..||:|||..:||.|:.|...||.|::||||.|.:|:..:|.||..:.|..|..|..::
Mouse    66 SKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVL 130

  Fly   122 VLANKQDMDGCMTVAEVHHALGLENLKNRT-FQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            ::|||||:...::::|:...|.:..|.:.| :.:..|.|..|:||.:.::.|.:.:..|:
Mouse   131 IVANKQDLRNSLSLSEIEKLLAMGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKRR 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 66/162 (41%)
Arl4aNP_031513.1 Arl4_Arl7 18..200 CDD:206719 67/173 (39%)

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