DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arf11l.2

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_004918747.2 Gene:arf11l.2 / 101734701 XenbaseID:XB-GENE-22065200 Length:188 Species:Xenopus tropicalis


Alignment Length:181 Identity:78/181 - (43%)
Similarity:115/181 - (63%) Gaps:4/181 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVL-SYFRGLLG--SREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQV-TYKNLK 61
            ||.:. |.::.|:|  ..:.||::||||.|||||:||:|:..|.||||||||||||.| ...|:.
 Frog     1 MGNLFSSLYQILMGFHGTKARIIMLGLDAAGKTTVLYKLKFNETVTTIPTIGFNVETVEPMHNVS 65

  Fly    62 FQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANK 126
            |.|||:|||..||..|:.|::|.|.:::||||||.:|...::.||..:|..:|:.|...||:|||
 Frog    66 FTVWDVGGQGRIRALWKYYFTNADGLVFVVDSADCERFQEARLELEAILDTDEMRGVPFVVMANK 130

  Fly   127 QDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQ 177
            ||:.|.....||...|||..::...:.:....||.|:||.:.::..:|.::
 Frog   131 QDLPGSRRPMEVAEELGLPKIQGHPWHVQGCCATTGDGLVEGLEVFTNLVK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 72/157 (46%)
arf11l.2XP_004918747.2 Arf_Arl 21..174 CDD:206644 72/152 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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