DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and ARL17B

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001350734.1 Gene:ARL17B / 100506084 HGNCID:32387 Length:181 Species:Homo sapiens


Alignment Length:85 Identity:47/85 - (55%)
Similarity:60/85 - (70%) Gaps:1/85 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGVL-SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQV 64
            ||.:. ..|:.|||.::||||||.||.||||||||:|::||.|..:||:||.||.|.|||..|.|
Human     1 MGNIFEKLFKSLLGKKKMRILILSLDTAGKTTILYKLKLGETVPAVPTVGFCVETVEYKNNTFAV 65

  Fly    65 WDLGGQTSIRPYWRCYYSNT 84
            ||:|....|||.|:.::.||
Human    66 WDVGSHFKIRPLWQHFFQNT 85

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 40/67 (60%)
ARL17BNP_001350734.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..>87 CDD:476819 47/85 (55%)
ARL17 115..175 CDD:464905
Blue background indicates that the domain is not in the aligned region.

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