DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl13a

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_004916817.1 Gene:arl13a / 100499404 XenbaseID:XB-GENE-1007191 Length:422 Species:Xenopus tropicalis


Alignment Length:169 Identity:55/169 - (32%)
Similarity:86/169 - (50%) Gaps:21/169 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 REMRILILGLDGAGKTTI---LYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDL------GGQ 70
            |.:.|:.||||.|||::|   :.|:...:|:::.....|..|      ::...:||      |||
 Frog    47 RPVTIIFLGLDNAGKSSIIRVIRRVPPCQVLSSAHVDPFRTE------IRLDRFDLTLLEMPGGQ 105

  Fly    71 TSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTV 135
            .: |..||.||:...|:::|||::|..|:......|..:||...:||..|::||||||....:..
 Frog   106 KN-RASWRLYYTQAHALVFVVDASDPGRMKEVACVLASVLRHPCVAGKPLLILANKQDKSSSLLT 169

  Fly   136 AEVHHALGLENL--KNRTF-QIFKTSATKGEGLDQAMDW 171
            :|:...|.||.|  :|:|. :|...||  |.......||
 Frog   170 SEIIELLSLETLVNENKTHCRIEPCSA--GAEFSSQHDW 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 54/166 (33%)
arl13aXP_004916817.1 P-loop containing Nucleoside Triphosphate Hydrolases 50..217 CDD:476819 54/166 (33%)

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