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Protein Alignment Arl1 and arl3
DIOPT Version :9
Sequence 1: | NP_524098.2 |
Gene: | Arl1 / 39745 |
FlyBaseID: | FBgn0000115 |
Length: | 180 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002938771.2 |
Gene: | arl3 / 100492073 |
XenbaseID: | XB-GENE-956688 |
Length: | 182 |
Species: | Xenopus tropicalis |
Alignment Length: | 180 |
Identity: | 78/180 - (43%) |
Similarity: | 114/180 - (63%) |
Gaps: | 2/180 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 GVLSYFRGLLGS--REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW 65
|:||..|.|..: :|:|||:||||.|||||:|.:|...::....||.|||::.|..:..|..||
Frog 2 GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVW 66
Fly 66 DLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMD 130
|:|||..||||||.|:.|||.:|||:|||||.|...:..||..:|.||:|:|..:::.|||||:.
Frog 67 DIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLL 131
Fly 131 GCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
.....:|:...|.|..:::|.:||...||..|||:...|:|:...:.::|
Frog 132 TAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKK 181
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Arl1 | NP_524098.2 |
Arl1 |
18..175 |
CDD:206718 |
71/156 (46%) |
arl3 | XP_002938771.2 |
Arl3 |
3..176 |
CDD:206721 |
76/172 (44%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1271528at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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