DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl3

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_002938771.2 Gene:arl3 / 100492073 XenbaseID:XB-GENE-956688 Length:182 Species:Xenopus tropicalis


Alignment Length:180 Identity:78/180 - (43%)
Similarity:114/180 - (63%) Gaps:2/180 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GVLSYFRGLLGS--REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVW 65
            |:||..|.|..:  :|:|||:||||.|||||:|.:|...::....||.|||::.|..:..|..||
 Frog     2 GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVW 66

  Fly    66 DLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMD 130
            |:|||..||||||.|:.|||.:|||:|||||.|...:..||..:|.||:|:|..:::.|||||:.
 Frog    67 DIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLL 131

  Fly   131 GCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            .....:|:...|.|..:::|.:||...||..|||:...|:|:...:.::|
 Frog   132 TAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 71/156 (46%)
arl3XP_002938771.2 Arl3 3..176 CDD:206721 76/172 (44%)

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