DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and arl11

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_002935781.1 Gene:arl11 / 100490310 XenbaseID:XB-GENE-1012125 Length:180 Species:Xenopus tropicalis


Alignment Length:167 Identity:73/167 - (43%)
Similarity:114/167 - (68%) Gaps:1/167 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTY-KNLKFQVWDLGGQTSIRP 75
            |..::.|::::|||.:||:||||:|::.::|.|.||:|||||.:.. ||:...|||:|||..:||
 Frog     9 LHKKQPRVVMMGLDYSGKSTILYKLKINQLVETFPTVGFNVEHIEMSKNVSVTVWDVGGQDKLRP 73

  Fly    76 YWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHH 140
            .|:.|..:||.:|:||||:|.||:..:..|||.:|..|.:||...::||||||:...:...|:.|
 Frog    74 NWKEYLEDTDVLIFVVDSSDPDRLPDATAELLSILNNENMAGVPFLILANKQDITDALPAKELKH 138

  Fly   141 ALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQ 177
            .|.|||..:|.::|...||..||||.:||:.:::.|:
 Frog   139 ILKLENYDDRPWEIQSCSAYTGEGLAEAMNAVASLLK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 71/157 (45%)
arl11XP_002935781.1 P-loop containing Nucleoside Triphosphate Hydrolases 15..173 CDD:476819 71/157 (45%)

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