DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and si:ch1073-165f9.2

DIOPT Version :9

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_002663882.1 Gene:si:ch1073-165f9.2 / 100333040 ZFINID:ZDB-GENE-141216-228 Length:181 Species:Danio rerio


Alignment Length:175 Identity:90/175 - (51%)
Similarity:121/175 - (69%) Gaps:0/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQ 70
            |.:..|...:|.|:|:.|||.|||||:||:|::|||||||||||||||.|.|||:.|.|||..||
Zfish     7 SLWTRLFEKKETRLLMFGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDFSGQ 71

  Fly    71 TSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTV 135
            |:::..||.|||||..:|:||||:|||||..:.:||..:|.|:||..|:|:|||||||:...|..
Zfish    72 TTMKSLWRHYYSNTQGLIFVVDSSDRDRIETAAEELNLLLAEDELRDAVLLVLANKQDLPKAMPA 136

  Fly   136 AEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            .|:...|||..|..|.:.:..|.|.:|.||.:..|||::.|..::
Zfish   137 QELTDRLGLHALTGRQWFVQSTCAVQGSGLYEGFDWLTDQLSKQQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 86/156 (55%)
si:ch1073-165f9.2XP_002663882.1 P-loop_NTPase 1..180 CDD:304359 90/172 (52%)
SAR 15..174 CDD:197556 86/158 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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