DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl1 and si:ch1073-165f9.2

DIOPT Version :10

Sequence 1:NP_524098.2 Gene:Arl1 / 39745 FlyBaseID:FBgn0000115 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_002663882.2 Gene:si:ch1073-165f9.2 / 100333040 ZFINID:ZDB-GENE-141216-228 Length:181 Species:Danio rerio


Alignment Length:175 Identity:89/175 - (50%)
Similarity:121/175 - (69%) Gaps:0/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SYFRGLLGSREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQ 70
            |.:..|...::.|:|:.|||.|||||:||:|::|||||||||||||||.|.|||:.|.|||..||
Zfish     7 SLWTRLFEKKQTRLLMFGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDFSGQ 71

  Fly    71 TSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTV 135
            |:::..||.|||||..:|:||||:|||||..:.:||..:|.|:||..|:|:|||||||:...|..
Zfish    72 TTMKSLWRHYYSNTQGLIFVVDSSDRDRIETAAEELNLLLAEDELRDAVLLVLANKQDLPKAMLA 136

  Fly   136 AEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSRK 180
            .|:...|||..|..|.:.:..|.|.:|.||.:..|||::.|..::
Zfish   137 QELTDRLGLHALTGRQWFVQSTCAVQGSGLYEGFDWLTDQLSKQQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl1NP_524098.2 Arl1 18..175 CDD:206718 86/156 (55%)
si:ch1073-165f9.2XP_002663882.2 None

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