DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment brm and IRC5

DIOPT Version :10

Sequence 1:NP_001261906.1 Gene:brm / 39744 FlyBaseID:FBgn0000212 Length:1658 Species:Drosophila melanogaster
Sequence 2:NP_116696.2 Gene:IRC5 / 850599 SGDID:S000001934 Length:853 Species:Saccharomyces cerevisiae


Alignment Length:967 Identity:280/967 - (28%)
Similarity:436/967 - (45%) Gaps:247/967 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 TTLETALNIKLYKRTKRQ----GLREARATEKL----EKQQKLEAERKRRQKHLEFLAAVLQHGK 525
            |.:|.|:..::..||:..    ..||....:..    :....|::|..:             |||
Yeast    11 TVVEDAVGARVAARTRNMSNGVNYREKEVNDLTADISDSDSDLDSEDNK-------------HGK 62

  Fly   526 DLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKR 590
            .     .|:.|.:...:....:.....:.|...:.|.::.:.:.:| |:|.:..:|.:|.:    
Yeast    63 G-----DNDTAPIWLQDDVHSDEDIQLDSEDDSDTEAVQAQVVDKL-AKDTKSEQKSLDDE---- 117

  Fly   591 LAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVH 655
                ||:.|....:|                 :.|:|.:|.::   |..|     .||:||..:|
Yeast   118 ----LSEMDTKTVSL-----------------KLKKLNEFVRQ---SQVY-----SSIIADTLLH 153

  Fly   656 VVEQCTGKKLTGDDAPMLKHLHRWLNMHPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKA 720
            ...:..... |.|::..                 ||||.|.          :::.|..:..||..
Yeast   154 RSNEVANAN-TKDNSNS-----------------DDEEHSS----------KKRKTKKKSITDFF 190

  Fly   721 QATGNDEDAKDLITKAKVEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLEWLV 785
            :....:||.   .|:....||                  ..::|..::.|..||.||::||.||:
Yeast   191 KKQKKNEDT---TTQNGAPDD------------------AAIKQPRLLKNCILKPYQLEGLNWLI 234

  Fly   786 SLYNNNLNGILADEMGLGKTIQTISLVTYL--MDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAV 848
            :||.|.||||||||||||||:|:|:|:.::  ||.|   ||:|:..|||||.||:.||.|:||.:
Yeast   235 TLYENGLNGILADEMGLGKTVQSIALLAFIYEMDTK---GPFLVTAPLSTLDNWMNEFAKFAPDL 296

  Fly   849 GVVSYKGSPQGRRLLQNQMRATKF-------NVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMK 906
            .|:.|.|: .|.:  :...:...|       .:::|:||.:::|..::....||::|:|||||:|
Yeast   297 PVLKYYGT-NGYK--ERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLK 358

  Fly   907 NHHCKLTQVL---NTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWF-----N 963
            |.:|:|.:.|   ||    ..|||||||||||.|.|||:||||::|.||.....|.:||     |
Yeast   359 NINCRLIKELKKINT----SNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLN 419

  Fly   964 APFATTGEKVE--LNEEETILIIRRLHKVLRPFLLRRLKKEV-EHQLPDKVEYIIKCDMSALQRV 1025
            ....:..|.:.  :|:|....:|..||.:|:|||||||||.| .:.||.|.||||.|.|::.|..
Yeast   420 LGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEK 484

  Fly  1026 LYK----------------------------HMQSKGV-----LLTDGSE--------------- 1042
            .||                            |:.::.:     ....|:|               
Yeast   485 FYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQM 549

  Fly  1043 -----KGKHGKGGAKALMNTIVQLRKLCNHPFMFQ----HIEEKYCDHTGGHGVVSGPDLYRVSG 1098
                 |....:...|.|.|.::|||::.:..|:|.    |.|:           ::...|.:.||
Yeast   550 DKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLHPED-----------LTLETLLKTSG 603

  Fly  1099 KFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAK 1163
            |.::|.:::|.|.:..|:||::.|....:.:|||:.....|...|:||:...|.|.:.|.|||:.
Yeast   604 KLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSS 668

  Fly  1164 GSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSV 1228
            .....:|||||||.|||:||..|||||:|||||||..||||.||.|||||.:.|.|.||...|::
Yeast   669 KDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTI 733

  Fly  1229 EERILAAARYKLNMDEKVIQAGMFDQ-------------------KSTGSERQQFLQTILHQD-- 1272
            |..||..|..|.|::..|||.|.|:.                   ..|..:..|.|..:|..|  
Yeast   734 EHVILTRAANKRNLERMVIQMGKFNNLKKLALNEGSFLKANKAGVNVTNKDLVQELSMLLMSDES 798

  Fly  1273 ----DNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKKEDEEIHPGRERLID 1325
                :|..::||:..:.::       :::|:|.......|..|.:        |::|
Yeast   799 NIGFENGGQKENKATEGQL-------TDKEVEELTNRSLEAYKAN--------RVVD 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brmNP_001261906.1 QLQ 173..202 CDD:462622
Pro-rich <247..401 CDD:464580
PTZ00121 <477..651 CDD:173412 29/181 (16%)
HSA 501..573 CDD:214727 10/71 (14%)
BRK 650..691 CDD:462196 5/40 (13%)
PLN03142 739..>1368 CDD:215601 232/689 (34%)
Bromo_SNF2L2 1425..1530 CDD:99947
IRC5NP_116696.2 PLN03142 74..>767 CDD:215601 252/796 (32%)
Blue background indicates that the domain is not in the aligned region.

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