DRSC/TRiP Functional Genomics Resources

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Protein Alignment brm and RAD54L

DIOPT Version :10

Sequence 1:NP_001261906.1 Gene:brm / 39744 FlyBaseID:FBgn0000212 Length:1658 Species:Drosophila melanogaster
Sequence 2:NP_003570.2 Gene:RAD54L / 8438 HGNCID:9826 Length:747 Species:Homo sapiens


Alignment Length:650 Identity:184/650 - (28%)
Similarity:297/650 - (45%) Gaps:109/650 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   768 MVNGTLKEYQIKGLEWL-VSLYNNNLNG----ILADEMGLGKTIQTISLVTYLMDRKKVMGPYL- 826
            :::..|:.:|.:|:::| ..:.:..:.|    |:|||||||||:|.|:|:..|:.:.....|.: 
Human   148 ILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEID 212

  Fly   827 ---IIVPLSTLPNWVLEFEKWAP------AVGVVSYKGSPQGRRLLQNQMRA-TKFNVLLTTYEY 881
               ::.|.|.:.||..|..||..      |:...|.....|......||..| ....:|:.:||.
Human   213 KAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYET 277

  Fly   882 VIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQV---LNTHYIAPYRLLLTGTPLQNKLPELWAL 943
            ......||.|.....:|.|||||:||...:..|.   |||    ..|:|::|||:||.|.|.::|
Human   278 FRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNT----SRRVLISGTPIQNDLLEYFSL 338

  Fly   944 LNFLLPSIFKSCSTFEQWFNAPF------ATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKE 1002
            ::|:...|..:...|::.|..|.      |.:....:|.||.    :|.|..::...|:||....
Human   339 VHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEER----LRELTSIVNRCLIRRTSDI 399

  Fly  1003 VEHQLPDKVEYIIKCDMSALQRVLYKHM--QSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLC 1065
            :...||.|:|.::.|.::.||..|||..  |:|      .:|:...||....:| ::|..|:|||
Human   400 LSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAK------PAEELLEGKMSVSSL-SSITSLKKLC 457

  Fly  1066 NHPFMF--QHIEEKYCDHTGGHGVVSGPDLY-----------RVSGKFELLDRILPKLKA-TNHR 1116
            |||.:.  :.:||:       .|.|...||:           ::|||..:||.||...:: ::.:
Human   458 NHPALIYDKCVEEE-------DGFVGALDLFPPGYSSKALEPQLSGKMLVLDYILAVTRSRSSDK 515

  Fly  1117 VLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGL 1181
            |:|....||.:.:.|.....|::.|:|||||...:.|.:::.:||:..|..|||:||::|||.||
Human   516 VVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGL 580

  Fly  1182 NLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKV 1246
            ||..|:.:|:||.||||..|.||..|..|.||:....:.||::..::||:|.....:|..:...|
Human   581 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCV 645

  Fly  1247 IQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAERKK 1311
            :                         |.|::.|......|:..:.|.......:...|:...|..
Human   646 V-------------------------DEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCV 685

  Fly  1312 EDEEIHPGRERLIDESELPDWLTKDD-----DEVER-------------FHYQYDEDTILGRGSR 1358
            ...:|.|..:.....|:|..|....|     |||.:             ||.:..|:.   ||.|
Human   686 NSRQIRPPPDGSDCTSDLAGWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQ---RGLR 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brmNP_001261906.1 QLQ 173..202 CDD:462622
Pro-rich <247..401 CDD:464580
PTZ00121 <477..651 CDD:173412
HSA 501..573 CDD:214727
BRK 650..691 CDD:462196
PLN03142 739..>1368 CDD:215601 183/649 (28%)
Bromo_SNF2L2 1425..1530 CDD:99947
RAD54LNP_003570.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
Required for chromatin remodeling, strand pairing activities and coupling of ATPase activity. /evidence=ECO:0000250 2..9
HepA <97..647 CDD:440319 162/545 (30%)
DEXHc_RAD54A 153..395 CDD:350825 73/249 (29%)
DEGH box 296..299 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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