Protein Alignment brm and CHR24

DIOPT Version :10

• Sequence 1: NP_001261906.1
• Gene: brm / 39744
• FlyBaseID: FBgn0000212
• Length: 1658
• Species: Drosophila melanogaster
• Sequence 2: NP_201200.2
• Gene: CHR24 / 836516
• AraportID: AT5G63950
• Length: 1090
• Species: Arabidopsis thaliana
• Alignment Length: 1106
• Identity: 272/1106 - (24%)
• Similarity: 467/1106 - (42%)
• Gaps: 309/1106 - (27%)

  Fly   556 QKKEQERIEKERMR-RLMAEDEEGYRKL----IDQKKDKR-----LAFLLSQTDEY--------- 601
            |.|::|.::.:..| .:|...::...||    |.:|||.:     ...:.||.|::
plant   128 QLKQKEEMQGDGGRNEIMGILDDLTSKLGTMSIQKKKDSQSNDFDACGVKSQVDKFDFEDAKSSF 192

  Fly   602 --ISNLTQ----MVKQHKDDQMKKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVHVVEQC 660
              :|:|::    :|..:.......|:::||           ||               ..:.|:.
plant   193 SLLSDLSKSSPDVVTTYNAGVNSIKDKQGK-----------SG---------------FAIREEQ 231

  Fly   661 TGKKLTGDDAPMLKHLHRWLNMHPGWDWIDDEEDS-CGSN-DDHKPKVEE-----QPTATEDATD 718
            |.|:.:.:....:.::.: .|.:.|..:.|:.||: .|.| |..|.:.:|     :.|...:.::
plant   232 TSKEFSREWEERISNVGK-QNSYSGRHFDDNSEDNRQGYNLDRGKSQCKEVDQSMKTTRHIEVSE 295

  Fly   719 KAQATGN---------DEDAKD----LITKAKVEDDEYRTEEQTYYSIAHTIHEKVVE-QASIMV 769
            |.:..|.         |||..|    :::..|..:.:.....::|.:..|...|:.:| :.||.:
plant   296 KIRTVGRSNAAKLRDLDEDDDDDDCLILSGKKAAEMKINKPARSYNAKRHGYDERSLEDEGSITL 360

  Fly   770 NG-------------TLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKV 821
            .|             .|..:|.:||.||.||:.....|||.|:||||||:|..|.:..|. ..|:
plant   361 TGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLF-HSKL 424

  Fly   822 MGPYLIIVPLSTLPNWVLEFEKWAPAVGVVS-----YKGSPQGR-----RLLQNQMRATKFNVLL 876
            :...|::.|.:.||:|:.|.    ..||:..     |..|.:.|     .:||.:      .:||
plant   425 IKRALVVAPKTLLPHWMKEL----ATVGLSQMTREYYGTSTKAREYDLHHILQGK------GILL 479

  Fly   877 TTYEYVIKDKAVLA------------KIQWKYMIIDEGHRMKNHHCK----LTQVLNTHYIAPYR 925
            |||:.|..:...|.            ..:|.|||:||||.:||.:.:    |.::.::|     |
plant   480 TTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSH-----R 539

  Fly   926 LLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI--LIIRRLH 988
            ::::|||:||.|.|||||.||..|.:....:.|:|.:........:|...:.|:.|  .:.:.|.
plant   540 IIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLR 604

  Fly   989 KVLRPFLLRRLKKEV------EHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLT--DGSEKGK 1045
            :.::||.|||||.||      ..:|..|.|.::...::|.||.||:...:..::|:  |||.
plant   605 EHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGSP--- 666

  Fly  1046 HGKGGAKALMNTIVQLRKLCNHPFMFQH--------------------IEEKYCDHTGGHGVVSG 1090
                     :..:..|:|:|:||.:...                    :.|:...|...:  |..
plant   667 ---------LAALTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADN--VDT 720

  Fly  1091 PDLY----RVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAE 1151
            .|..    .:|.|...:..:|..|....||||:|.|..:.:.:|:|.|....:.:||:||||||.
plant   721 DDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAP 785

  Fly  1152 DRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNE 1216
            ||.:.:.:|. :|....:|||:::.|||||.|..||.|::.|..|||..|.|:.|||:||||..:
plant   786 DRLKTVEEFQ-EGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKD 849

  Fly  1217 VRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNE------ 1275
            |.|.||||..:|||:|     |:    ::|.:.|:|   .|.:|.::.::....||..|
plant   850 VIVYRLMTSATVEEKI-----YR----KQVYKGGLF---KTATEHKEQIRYFSQQDLRELFSLPK 902

  Fly  1276 -------------EEEENEVPDDEMI--------NMMIARSEEEIEIFKR---MDAERKKEDEEI 1316
                         ||..|::..||.:        .:.||.......:|.:   :.|.:|.|:|:|
plant   903 GGFDVSPTQQQLYEEHYNQIKLDEKLESHVKFLETLGIAGVSHHSLLFSKTAPIQAIQKDEEEQI 967

  Fly  1317 HPGRERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEWLKAIDDG 1381
            .  ||..:                           :|||.|.         |:::    ..:.:|
plant   968 R--RETAL---------------------------LLGRASA---------SISQ----DTVING 990

  Fly  1382 AEFDEEEEEDDSKRKRRKRKNRKEESDDDSLILKRRRRQNLDKR---SKKQMHKIMSAVIKHNQD 1443
            |::..:.::                             .|||||   |.....::..:|||
plant   991 ADYAFKPKD-----------------------------VNLDKRINISPVDDKELSESVIK---- 1022

  Fly  1444 GRTLSEPFMKLPSR---QRLPDYYEIIKRPVDIKKILQRIEDCKYAD-LN-----ELEKDFMQLC 1499
             ..|:...|.|.::   .||||....|::  .|.::.:.::|.|.|: :|     :||:|..:..
plant  1023 -ARLNRLTMLLQNKGTVSRLPDGGAKIQK--QIAELTRELKDMKAAERINMPQVIDLEEDISRKM 1084

  Fly  1500 Q 1500
            |
plant  1085 Q 1085

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
brm	NP_001261906.1	QLQ	173..202	CDD:462622
		Pro-rich	<247..401	CDD:464580
		PTZ00121	<477..651	CDD:173412	22/119 (18%)
		HSA	501..573	CDD:214727	4/17 (24%)
		BRK	650..691	CDD:462196	5/40 (13%)
		PLN03142	739..>1368	CDD:215601	200/732 (27%)
		Bromo_SNF2L2	1425..1530	CDD:99947	22/88 (25%)
CHR24	NP_201200.2	PLN03142	323..>872	CDD:215601	175/588 (30%)
		DEXHc_ERCC6L	377..614	CDD:350759	78/252 (31%)