Protein Alignment brm and CHR5

DIOPT Version :10

• Sequence 1: NP_001261906.1
• Gene: brm / 39744
• FlyBaseID: FBgn0000212
• Length: 1658
• Species: Drosophila melanogaster
• Sequence 2: NP_178970.3
• Gene: CHR5 / 815823
• AraportID: AT2G13370
• Length: 1724
• Species: Arabidopsis thaliana
• Alignment Length: 1346
• Identity: 387/1346 - (28%)
• Similarity: 599/1346 - (44%)
• Gaps: 348/1346 - (25%)

  Fly   526 DLREFHRNNKAQLARMNKAVMNHHANAERE-------QKKEQERIEKERMRRLMAEDEEGYRKL- 582
            |..:.:...|.::.:.:|......|..||:       ||::....:.:.......:::||:|.|
plant   293 DYEDDYGTKKPKVRQQSKGFRKSSAGLERKSFHVSSRQKRKTSYQDDDSEEDSENDNDEGFRSLA 357

  Fly   583 ----------------IDQKKD--------KRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEE 623
                            |.|..:        ::::::.|:..|.|.: .:..|..|||    .|||
plant   358 RRGTTLRQNNGRSTNTIGQSSEVRSSTRSVRKVSYVESEDSEDIDD-GKNRKNQKDD----IEEE 417

  Fly   624 GKRLIQ--FKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRW---LNMH 683
            ...:|:  ...:|...||.:..:..|.|..:...:.:       |..|...::.|.:|   .::|
plant   418 DADVIEKVLWHQLKGMGEDVQTNNKSTVPVLVSQLFD-------TEPDWNEMEFLIKWKGQSHLH 475

  Fly   684 PGWDWIDDEEDSCGSND--DHKPKVEEQPTATEDATDKAQATGNDEDAK---------------- 730
            ..|..:.|.::..|...  ::..||.|: .....|..:.:...||...:
plant   476 CQWKTLSDLQNLSGFKKVLNYTKKVTEE-IRYRTALSREEIEVNDVSKEMDLDIIKQNSQVERII 539

  Fly   731 -DLITK--------------------------------AKVEDDEYRTEEQTYYSIAHTIHEKVV 762
             |.|:|                                |:|..|||:..|   .|||  :..|:|
plant   540 ADRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAIDEYKARE---VSIA--VQGKMV 599

  Fly   763 EQ------ASI---------MVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLV 812
            ||      ||:         ::.|||::||::||.:||:.:.|:.|.|||||||||||:|::|::
plant   600 EQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSML 664

  Fly   813 TYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQ-----NQM---RA 869
            .:|.:.:::.||:|::||||||.||..||.||.|.:.::.|.|:...|.:.|     |:.   |.
plant   665 GFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRP 729

  Fly   870 TKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQ 934
            .|||.||||||.|:||||||:||:|.|:::||.||:||...:|...| ..:....:||:||||||
plant   730 IKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTAL-LEFSTKNKLLITGTPLQ 793

  Fly   935 NKLPELWALLNFLLPSIFKSCSTF-EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRR 998
            |.:.||||||:||.|..||:...| |.:.|..        ..||.|    :..||..|||.:|||
plant   794 NSVEELWALLHFLDPGKFKNKDEFVENYKNLS--------SFNESE----LANLHLELRPHILRR 846

  Fly   999 LKKEVEHQLPDKVEYIIKCDMSALQRVLYK-------HMQSKGVLLTDGSEKGKHGKGGAKALMN 1056
            :.|:||..||.|:|.|::.:||.||:..||       |..:|||            :|...:|:|
plant   847 VIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGV------------RGNQVSLLN 899

  Fly  1057 TIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRV---SGKFELLDRILPKLKATNHRVL 1118
            .:|:|:|.|||||:|:.     .||..|..:.....|.::   |||..:||::|.:|:.|.||||
plant   900 IVVELKKCCNHPFLFES-----ADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVL 959

  Fly  1119 LFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNL 1183
            :|.||.:.:.|:.:||..|.|.:.||||:||||.|.:.:..|||..||.|.|||||||||||:||
plant   960 IFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINL 1024

  Fly  1184 QTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQ 1248
            .||||||||||||||..||||..|||||||:..|.:.|.:|..||||.||..|:.|:.:|..|||
plant  1025 ATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQ 1089

  Fly  1249 ----AGMFDQKST--GS-----ERQQFL----QTILHQDDNEEEEENEVPDDEMINMMIARSEEE 1298
                .|..:::.|  ||     |....|    :.:..:|.|:||.:..:...: |:.::.|:|:
plant  1090 KLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMD-IDEILERAEQ- 1152

  Fly  1299 IEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDE------VERFHYQYDEDTILGRGS 1357
                    .|.|..||..|    .|:...::.::...:||.      ::.......|:.:..|.:
plant  1153 --------VEEKHTDETEH----ELLGAFKVANFCNAEDDGSFWSRWIKPDSVVTAEEALAPRAA 1205

  Fly  1358 RQRKEVDYTDSLTEKEWLKAIDDGAEFDEEEEEDDSKRKRRKRKNRKEESDDDSL-ILKRRRRQ- 1420
            |..|  .|.|........|....|:|..|..|        |.:|.||.|....|. :|:....|
plant  1206 RNTK--SYVDPSHPDRTSKRKKKGSEPPEHTE--------RSQKRRKTEYFVPSTPLLEGTSAQV 1260

  Fly  1421 ------NLDKRSKKQMHKIMSAVIKHNQ----------------------------DGRTLS--- 1448
                  ||.||..::.::.:.....|||                            ||...|
plant  1261 RGWSYGNLPKRDAQRFYRTVMKFGNHNQMACIAEEVGGVVEAAPEEAQVELFDALIDGCKESVET 1325

  Fly  1449 ---EP------FMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYAD-------LNELE-KDFM 1496
               ||      |..:|.:..     |::||...::.:.:||.  :|.|       |:.|: .::.
plant  1326 GNFEPKGPVLDFFGVPVKAN-----ELLKRVQGLQLLSKRIS--RYNDPISQFRVLSYLKPSNWS 1383

  Fly  1497 QLCQNAQIYNEEASL--------------IYLD-SIALQKVFV---------------GARQRIT 1531
            :.|...||  ::|.|              |.|| |:.|.|...               ..::|.|
plant  1384 KGCGWNQI--DDARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVELQHHETFLPRAPNLKERAT 1446

  Fly  1532 AAADAAAVAAGDNTGEAHGNGGSDNSDNDDDDGGDDGSDDEEIATTSAAAVKMKLKLNKSLAS-- 1594
            |..:....|||...                              |.:.|:.|...|:..:|.:
plant  1447 ALLEMELAAAGGKN------------------------------TNAKASRKNSKKVKDNLINQF 1481

  Fly  1595 -APATPTQSSSNVSSGAATTSKKQTRRKRS-----QKKYTISDDDD 1634
             |||...:..|..::.:..::|...|:.:.     :::..:|||.:
plant  1482 KAPARDRRGKSGPANVSLLSTKDGPRKTQKAEPLVKEEGEMSDDGE 1527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
brm	NP_001261906.1	QLQ	173..202	CDD:462622
		Pro-rich	<247..401	CDD:464580
		PTZ00121	<477..651	CDD:173412	30/158 (19%)
		HSA	501..573	CDD:214727	8/53 (15%)
		BRK	650..691	CDD:462196	6/43 (14%)
		PLN03142	739..>1368	CDD:215601	270/683 (40%)
		Bromo_SNF2L2	1425..1530	CDD:99947	31/182 (17%)
CHR5	NP_178970.3	MSCRAMM_ClfA	<106..420	CDD:468110	24/131 (18%)
		CD1_tandem	418..498	CDD:349307	14/86 (16%)
		CD2_tandem	531..587	CDD:349306	8/55 (15%)
		PLN03142	612..>1152	CDD:215601	243/570 (43%)
		DUF4208	1534..1626	CDD:464035