DRSC/TRiP Functional Genomics Resources

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Protein Alignment brm and Ep400

DIOPT Version :10

Sequence 1:NP_001261906.1 Gene:brm / 39744 FlyBaseID:FBgn0000212 Length:1658 Species:Drosophila melanogaster
Sequence 2:NP_083613.2 Gene:Ep400 / 75560 MGIID:1276124 Length:3035 Species:Mus musculus


Alignment Length:2390 Identity:453/2390 - (18%)
Similarity:735/2390 - (30%) Gaps:1001/2390 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PMPPPQAP----------------------SPMAPPSQSPAPSPHSPYPHQ--------QPGPLQ 44
            |:|.|.:|                      |||:...|:.:|:..||.|.|        .|||..
Mouse    94 PLPNPTSPGFQFGAQQRRFEHGSPSYIQVTSPMSQQVQTQSPTQPSPGPGQTLQNVRAGAPGPGL 158

  Fly    45 G----PPPPG-------------HPGAYGHPMQHGPPG--QGPPGHHMPPHHQGMIF-------- 82
            |    .|..|             .|.:.||.:....||  |...|..:...|.|...        
Mouse   159 GICSNSPTGGFVDASVLVRQISLSPSSGGHFVFQEAPGLTQMAQGAQVQLQHSGAPITVRERRLS 223

  Fly    83 -----SKGP--HMGMQMPP----TG--PNMSP--YQTHGMPPNAPT------------------- 113
                 |.|.  |:|.|.|.    ||  |..||  ..|..:||...:                   
Mouse   224 QPHAQSGGTIHHLGPQSPAAAGGTGLQPLASPNHITTASLPPQISSIIQGQLIQQQQQVLQGQPM 288

  Fly   114 --------QPCIVSP--GGPPG----GPPPPERSSQENLHALQRAI--DSMEEKGLQEDPR---- 158
                    .|.::.|  |||..    .||||...|:..:.....::  .||...|:::.|:    
Mouse   289 NRSLGFERTPGVLLPGVGGPSAFGMTSPPPPTSPSRTTMPPGLSSVPLTSMGSSGMKKVPKKLEE 353

  Fly   159 -------------------YSQLLAMRATSKH--------QHLNGNQVNLLRTQITAYRLL---- 192
                               |.::.|::...|.        |||.||.::.|..:...|..|    
Mouse   354 IPPASQEMAQMRKQCLDYHYKEMEALKEVFKEYLIELFFLQHLQGNMMDFLAFKKKHYAPLQAYL 418

  Fly   193 ------------------ARNKPIS----------------------MQMQQALQAAQQQPPPGP 217
                              .:::.|:                      .:.||.:...:|...|..
Mouse   419 RQNDLDIEEEEEEEEEEEGKSEVINDEHQSLTGSLVVGPGSATEADPFKRQQVMPPTEQSKRPRL 483

  Fly   218 PIGPPGAPGGPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASN-------------PYGP 269
            .:|.||..      .||.|.....|.||..|....|.||   ||.|:.             ..||
Mouse   484 EVGHPGVV------FQHPGVNAGVPLQQLMPTVQGGMPP---TPQATQLTGQKQSQQQYDPSTGP 539

  Fly   270 PVPGQKMQVAPPPPHMQQGQPLPP-QPPQVGGPPPIQ------------QQQPPQQQQQQSQP-P 320
            ||........|||   |....||| ..|....|..:|            |.|.|.:.||.:.| |
Mouse   540 PVQNAASLHTPPP---QLPARLPPASVPATALPSTLQFSQQSQMVEASTQLQIPVKTQQLNAPIP 601

  Fly   321 PPEPHQHQLPNG--GKPLSMGPSGGQPLIPSSPMQPQVRGTLPGMPP-----------------G 366
            .|.|.|...|:.  .:|....|..|:..:.:|.:..|.:......||                 .
Mouse   602 APLPSQLPAPSSQPAQPALHVPMPGKAQMQTSQLSSQTQTVASTRPPLDSAQPCQRSLPTSSSSS 666

  Fly   367 SQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRIAARISLRMQELQRLPA 431
            |.||..|.||... |....|:.:|:..|..|    |.|||   .|...:|.....:.|...:..|
Mouse   667 SLVPVSGSGPGPS-PARSSPVNRPSSATNKA----LSPIT---SRSPGVAVSAPPKPQSPAQNAA 723

  Fly   432 TMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEK 496
            :..:..:.:.|.::                        |||..::.:: ...:::||...|...|
Mouse   724 SSQDGSQDKLAEQI------------------------TLENQIHQRI-ADLRKEGLWSLRRLPK 763

  Fly   497 LEKQQKLEAERKRRQKHLEFLAAVLQ-HGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQ 560
            |:       |..|.:.|.::|...:| ...|..:..|...|...::.:.|..||    .|:|..:
Mouse   764 LQ-------EAPRPKSHWDYLLEEMQWMATDFAQERRWKLAAAKKLVRTVARHH----EEKKLRE 817

  Fly   561 ERIEKE---RMRRL---MAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMK- 618
            ||.:||   |:||:   .|.:.|.:...|:|..:.:|...|.:..:...||.::.::.|:.::| 
Mouse   818 ERGKKEEQSRLRRIAATTAREIEYFWSNIEQVVEIKLQVELEEKRKKALNLQKVSRRGKESRLKG 882

  Fly   619 ---------------KKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVH--VVEQCTGKKLT 666
                           :|.:....|...:.|          ||...:.:...|  :|:..|  :||
Mouse   883 FDTSPEHSLDLGISGRKRKASTSLTDDEVE----------DEEETIEEEEAHEGLVDHHT--ELT 935

  Fly   667 G----DDAPMLKHLHRWLNMH-PGWDWID---DEEDSCGSNDDHKPKVEEQPTATEDATDKAQAT 723
            .    .:.|::..:..:.... |.:.|..   |.|:|.|..|     ||:.|:..|...|..   
Mouse   936 NLAKEAELPLIDLMKLYEGAFLPNFQWPQPEPDHEESSGEED-----VEDCPSDRESRRDSV--- 992

  Fly   724 GNDEDAKDLITKAKVEDDEYRTEEQTYYSIAHT--------IHEKVVEQASIMVN---------- 770
                    ||....:. |:::..|:.....::|        :.|.::.:.|..|.          
Mouse   993 --------LIDSLFIM-DQFKAAERMSIGKSNTKDITEVTAVAEAILPKGSARVTTAVKFSAPSL 1048

  Fly   771 --GTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLST 833
              |.|::||..||:||..||..|||||||||.|||||:|.|:...:|...:...||:|:::....
Mouse  1049 LYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVMRSCN 1113

  Fly   834 LPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATK---FNVLLTTYEYVIKDKAVLAKIQWK 895
            :..|.||.::|.|.:..:||.||  .|.|...:...|:   |::.:|:|:...:.....:::.||
Mouse  1114 ILKWELELKRWCPGLKTLSYVGS--HRELKAKRQEWTEPNNFHICITSYKQFFRGYTAFSRVHWK 1176

  Fly   896 YMIIDEGHRMKNHHCKLTQVLNTHYIAPY------RLLLTGTPLQNKLPELWALLNFLLPSIFKS 954
            .:::||..|:|.       :...|:.|.:      ||||...||.|...|||.:::||:|.|.:.
Mouse  1177 CLVVDEMQRVKG-------MTERHWEAIFKLQSQQRLLLIDVPLHNTFLELWTMVHFLIPGISRP 1234

  Fly   955 CSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDM 1019
            ..:|      |.....|:   |::....::.|||:|.:||:|||.|::||.||..|.|:::||.:
Mouse  1235 YLSF------PLKAPNEE---NQDYYHKMVIRLHRVTQPFILRRTKRDVEKQLTRKYEHVLKCRL 1290

  Fly  1020 SALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQ------------ 1072
            |:.|:.||     :.|:|...:::... .|...::::.:.:|:::||||.:.:            
Mouse  1291 SSRQKALY-----EDVILQPRTQEALK-SGHFVSVLSVLTRLQRICNHPGLVEPRVPGSSFAAGS 1349

  Fly  1073 -------------------------------------HIEEKYC--------------------- 1079
                                                 |..|..|                     
Mouse  1350 LQYKSASLILRVLEREFWKETDLSIFDLIGLENKITRHEAELLCKKKVTRKLMEEVFASPPPSAR 1414

  Fly  1080 ---------------------------------------------------------------DH 1081
                                                                           |.
Mouse  1415 PAAVKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRMANTNTSTATPQGQVRGRPPIATFSANPDT 1479

  Fly  1082 TGGHGV----------------------------------------------------------- 1087
            .||..|                                                           
Mouse  1480 KGGEVVKIAQLASIAGPQSRVAQPETPVTLQFQGNKFTLSHSQLRQLTAGQPLQLQGSVLQIVSA 1544

  Fly  1088 --------------------------------VSGP----------------------------- 1091
                                            .|||                             
Mouse  1545 PGQPYLRAPGPVVMQTVSQAGAVHSTLGSKPPTSGPSPAPLTPQVGVPGRVAVSAMAVGEPGLAS 1609

  Fly  1092 -----------------------------------------DLYRV------------------- 1096
                                                     ||.|:                   
Mouse  1610 KPASPAAGPTQEEKSRLLKERLDQIHFINERRCSQAPVYGRDLLRICSLPGRRKRPLCWSLDSNF 1674

  Fly  1097 ----------------------------------------------------------------- 1096
                                                                             
Mouse  1675 GKGPKGVNYDMSLSKSEGDLILTLSQESLQDVLGRVACVIPPVVATPPSLWVARPPSLYSSRLRA 1739

  Fly  1097 ------------------------------------SGKFELLDRILPKLKATNHRVLLFCQMTQ 1125
                                                |||.|.|..:|.|||:...|||:..||..
Mouse  1740 LRQCLREHTGPYHRQLQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVL 1804

  Fly  1126 CMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVV 1190
            .:.|:|.:|.:....|:|:|....:|.|.||:|.|| :...:|..||||.:...|:||..|||||
Mouse  1805 MLDILEMFLNFHYLTYVRIDENANSEQRQELMRSFN-RDRRIFCALLSTHSRATGINLVEADTVV 1868

  Fly  1191 IFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1255
            .:|:|.||..|.:||:...|||:..::.:.||::.||:||::|......| :.|...|...:...
Mouse  1869 FYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNGTKDL-IREVAAQGNDYSMA 1932

  Fly  1256 -STGSERQQFLQTILHQDDN----EEEE----ENEVPDDEMINMMIARS-EEEIEIFKRMDAERK 1310
             .|....|:..:.....||.    :.||    ..|....|.|...|||. .|.::..:.::.:.:
Mouse  1933 FLTQRTIQELFEVYSPMDDTGFPVKAEEFVVLSQEPSVSETIAPKIARPFIEALKSIECLEEDAQ 1997

  Fly  1311 KEDEEIHPGRERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKE-- 1373
            :..||..||...:.        ::.|.|     ..:|||:.     |:..:..|:.:.||..|  
Mouse  1998 RSTEEAVPGSSSVA--------VSSDSD-----GSRYDEEP-----SQLEELADFMEQLTPIEKY 2044

  Fly  1374 ---WLKAIDDGAEFDEEEEEDD------------SKRKRRKRKNR----KEES------------ 1407
               :|:......|.::|...:|            :.|..::|:.|    :||:            
Mouse  2045 ALNYLELFHTTTEQEKERISEDLVMASMKDWETRNARALQEREARLQLEQEEAELLTYTREDAYT 2109

  Fly  1408 -------------------------DDDSL------------------------ILKRRRRQNLD 1423
                                     ||:.:                        :.|.|:|...|
Mouse  2110 MEYVYEDADGQTEVMPLWTPPTPPQDDNDIYIDSVMCLMYETTPIPEAKLPPVYVRKERKRHKTD 2174

  Fly  1424 K----RSKKQMH------------KIMSAVIKHNQDGRTLSEPFM---KLPSRQRLPDYYEIIKR 1469
            .    |.|||.|            :....::|..::|:...:..:   :.|..:.||.|.:....
Mouse  2175 PSAAGRKKKQRHGEAVVPPRSLFDRATPGMLKIRREGKEQKKNLLLKQQTPFAKPLPTYVKSSGE 2239

  Fly  1470 PVDIK---------KILQRIEDCKYADLN------------ELEKDFMQLC-------------- 1499
            |....         .:||.::......||            :|..|.:..|              
Mouse  2240 PAQDSPDWLIGEDWALLQAVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNRY 2304

  Fly  1500 ------------------QNAQIY----NEEASLIYLDSIALQKVFVGAR 1527
                              :.:|||    |...:.:|.....|.|:..|.|
Mouse  2305 ENVIIPREEGKSKNNRPLRTSQIYAQDENATHTQLYTSHFELMKMTAGKR 2354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brmNP_001261906.1 QLQ 173..202 CDD:462622 8/72 (11%)
Pro-rich <247..401 CDD:464580 50/199 (25%)
PTZ00121 <477..651 CDD:173412 40/196 (20%)
HSA 501..573 CDD:214727 20/78 (26%)
BRK 650..691 CDD:462196 8/50 (16%)
PLN03142 739..>1368 CDD:215601 204/1081 (19%)
Bromo_SNF2L2 1425..1530 CDD:99947 28/175 (16%)
Ep400NP_083613.2 EP400_N 1..451 CDD:434938 68/356 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..149 8/23 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..250 8/27 (30%)
Atrophin-1 <446..>718 CDD:460830 70/291 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..482 3/33 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..564 18/62 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..732 32/141 (23%)
HSA 762..833 CDD:214727 22/81 (27%)
HepA 815..>1336 CDD:440319 149/573 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 877..915 5/47 (11%)
Interactions with RUVBL1 and RUVBL2. /evidence=ECO:0000250 913..1327 124/456 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 960..987 9/31 (29%)
DEAD-like_helicase_N 1053..1269 CDD:475120 77/233 (33%)
DEAD box-like 1181..1184 2/2 (100%)
PHA03247 <1407..1626 CDD:223021 7/218 (3%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1436..1466 0/29 (0%)
SF2_C_SNF 1776..1901 CDD:350180 51/125 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1996..2025 9/41 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2166..2190 9/23 (39%)
Interaction with ZNF42. /evidence=ECO:0000269|PubMed:12653961 2403..2662
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2404..2497
Chi1 2497..>2638 CDD:442692
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2697..2753
SP1-4_N <2815..3027 CDD:425404
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2991..3035
Blue background indicates that the domain is not in the aligned region.

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