Sequence 1: | NP_001261906.1 | Gene: | brm / 39744 | FlyBaseID: | FBgn0000212 | Length: | 1658 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001362194.1 | Gene: | smarca4 / 496545 | XenbaseID: | XB-GENE-483983 | Length: | 1599 | Species: | Xenopus tropicalis |
Alignment Length: | 1728 | Identity: | 906/1728 - (52%) |
---|---|---|---|
Similarity: | 1112/1728 - (64%) | Gaps: | 237/1728 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MASPSP--ANSPMPPPQ---APSPMAPPSQSPAPSPHSPYPHQQPGPLQGPP-PPGHPGAYGHPM 59
Fly 60 QHGPPGQGPPGHHM----------------PPHHQ--GMIFSKGPHMGMQMPPTGPNMSPYQTH- 105
Fly 106 -GMPP---NAPTQPCIVSPGGPPGGPPPPERSSQENLHALQRAIDSMEEKGLQEDPRYSQLLAMR 166
Fly 167 ATSKH-QHLNGNQVNLLRTQITAYRLLARNKPISMQMQQALQAAQQQPPPG-----PPIGPPGAP 225
Fly 226 G---GPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASNPYGPPVPGQKMQVAPPPPHMQQ 287
Fly 288 GQPLPPQPPQVGGPPPIQQQQ--PPQQQQQQSQPPPPEPHQHQLPNGGKPLSMGPSGGQPLIPSS 350
Fly 351 PMQPQVRGTLPGMPPGSQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRI 415
Fly 416 AARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDTTLETALNIKLY 480
Fly 481 KRTKRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHGKDLREFHRNNKAQLARMNKAV 545
Fly 546 MNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVK 610
Fly 611 QHKDDQ-MKKKEEEGKRLIQFKKE-----LLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDD 669
Fly 670 APMLKHLHRWLNMHPGWDWI--DDEEDSCGSNDDHKPKVEEQPTATE----DATDKAQATGNDE- 727
Fly 728 ---DAKDLITKAKVE-DDEYRTEE------QTYYSIAHTIHEKVVEQASIMVNGTLKEYQIKGLE 782
Fly 783 WLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPA 847
Fly 848 VGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKL 912
Fly 913 TQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNE 977
Fly 978 EETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSE 1042
Fly 1043 KGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTG-GHGVVSGPDLYRVSGKFELLDRI 1106
Fly 1107 LPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFL 1171
Fly 1172 LSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAA 1236
Fly 1237 RYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIARSEEEIEI 1301
Fly 1302 FKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYT 1366
Fly 1367 DSLTEKEWLKAIDDGAEFDEEEEEDDSKRKRRKRK-------------NRKEESDDDSLILKRRR 1418
Fly 1419 RQNLDKRS------KKQMHKIMSAVIKHNQ--DGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKK 1475
Fly 1476 ILQRIEDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRITAAADAAAVA 1540
Fly 1541 AGDNTGEAHGNGGSDNSDNDDDDGGDDGSDDEEIATTSAAAVKMKLKLNKSLASAPATPTQSSSN 1605
Fly 1606 VSSGAATTSKKQTRRKRSQK-------KYTISDDDDDD 1636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brm | NP_001261906.1 | QLQ | 172..202 | CDD:214931 | 12/29 (41%) |
Drf_FH1 | 251..390 | CDD:283903 | 36/140 (26%) | ||
HSA | 501..573 | CDD:214727 | 46/71 (65%) | ||
BRK | 649..693 | CDD:197800 | 17/45 (38%) | ||
PHA02934 | 687..>824 | CDD:165245 | 71/153 (46%) | ||
SNF2_N | 776..1071 | CDD:278600 | 245/294 (83%) | ||
DEXDc | 793..932 | CDD:238005 | 105/138 (76%) | ||
Helicase_C | 1097..1212 | CDD:278689 | 92/114 (81%) | ||
SnAC | 1304..1375 | CDD:291293 | 37/70 (53%) | ||
Bromo_SNF2L2 | 1425..1530 | CDD:99947 | 62/112 (55%) | ||
smarca4 | NP_001362194.1 | QLQ | 164..198 | CDD:370169 | 14/33 (42%) |
SMC_prok_A | 341..>560 | CDD:274009 | 152/218 (70%) | ||
HSA | 446..516 | CDD:369406 | 44/69 (64%) | ||
BRK | 597..639 | CDD:197800 | 16/41 (39%) | ||
DEXHc_SMARCA4 | 715..965 | CDD:350820 | 200/249 (80%) | ||
PLN03142 | 734..>1216 | CDD:215601 | 390/481 (81%) | ||
SnAC | 1275..1340 | CDD:373166 | 33/64 (52%) | ||
Bromo_SNF2L2 | 1408..1515 | CDD:99947 | 61/106 (58%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 498 | 1.000 | Domainoid score | I356 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1572 | 1.000 | Inparanoid score | I88 |
OMA | 1 | 1.010 | - | - | QHG52479 | |
OrthoDB | 1 | 1.010 | - | - | D41262at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001147 | |
OrthoInspector | 1 | 1.000 | - | - | otm49003 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10799 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X702 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.080 |