Sequence 1: | NP_001261906.1 | Gene: | brm / 39744 | FlyBaseID: | FBgn0000212 | Length: | 1658 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001245851.1 | Gene: | Chd1 / 33505 | FlyBaseID: | FBgn0250786 | Length: | 1900 | Species: | Drosophila melanogaster |
Alignment Length: | 1642 | Identity: | 434/1642 - (26%) |
---|---|---|---|
Similarity: | 655/1642 - (39%) | Gaps: | 415/1642 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 216 GPPIGPPGAPGGPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASNPYGPPVPGQKMQVAP 280
Fly 281 PPPHMQQGQPLPPQPPQVGGPPPIQQQQPPQQQQQQSQPPPPEPHQHQLPNGGKPLSMGPSGGQP 345
Fly 346 LIPSSPMQPQVRGTLPGMPPGSQVPQPGGGPQR----QVPPAG------MPMPKPNRITTVAKPV 400
Fly 401 GLDPITLLQERENRIAARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCT 465
Fly 466 RRDTTLETALNIKLYKR--TKRQG----LREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQHG 524
Fly 525 KDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQ-ERIEKERMRR---------LMAEDEEGY 579
Fly 580 --RKLIDQKK----DKRLAFLLSQTD-EYISNLTQMVKQHKD---------DQMKKKEEE---GK 625
Fly 626 RL------------IQFKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHR 678
Fly 679 WLNMHPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDAT------DKAQATGNDEDAKDLITKAK 737
Fly 738 VEDDEYRTEEQTYYSIAHTIHEKVVEQASIMVNG-TLKEYQIKGLEWLVSLYNNNLNGILADEMG 801
Fly 802 LGKTIQTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQ-- 864
Fly 865 ----NQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYR 925
Fly 926 LLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHK 989
Fly 990 VLRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKAL 1054
Fly 1055 MNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLL 1119
Fly 1120 FCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQ 1184
Fly 1185 TADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQ- 1248
Fly 1249 -----AGMFDQKSTG--SERQQF----LQTIL-------------HQDD------------NEEE 1277
Fly 1278 EENEVPDDEMINMM----IARSEEE--------------------------IEIFKRM--DAERK 1310
Fly 1311 KEDEEIH--PGRERLIDESELPDWLTKD-------DDEVERFHYQYDED--------TILGRGSR 1358
Fly 1359 QRKEVDYTDS---------------------------LTEKEW--LKAI-----DDGAEFDEEEE 1389
Fly 1390 EDDSKRKRRKRKNRKEESDDDSLILKRRRRQ--------NLDKRSKKQMHKIMSAVIKHNQDGRT 1446
Fly 1447 LSEPFMKLPSRQRLPDYYEIIKRPV-DIKKILQRIEDCKY------------------ADLNELE 1492
Fly 1493 KDFMQLCQNAQIYNEEASLIYLDSIALQKVFV---GARQRITAAADAAAVAAGDNTGEAHGNGGS 1554
Fly 1555 DNSDNDDDDGGDDGSDDEEIATTSAAAVKMKLKLNKSLAS---APATPTQSSSNVSSGAATTSKK 1616
Fly 1617 QTRRKRSQKKYTISDDD 1633 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brm | NP_001261906.1 | QLQ | 172..202 | CDD:214931 | |
Drf_FH1 | 251..390 | CDD:283903 | 28/148 (19%) | ||
HSA | 501..573 | CDD:214727 | 15/81 (19%) | ||
BRK | 649..693 | CDD:197800 | 7/43 (16%) | ||
PHA02934 | 687..>824 | CDD:165245 | 35/143 (24%) | ||
SNF2_N | 776..1071 | CDD:278600 | 127/301 (42%) | ||
DEXDc | 793..932 | CDD:238005 | 65/144 (45%) | ||
Helicase_C | 1097..1212 | CDD:278689 | 71/114 (62%) | ||
SnAC | 1304..1375 | CDD:291293 | 22/118 (19%) | ||
Bromo_SNF2L2 | 1425..1530 | CDD:99947 | 21/126 (17%) | ||
Chd1 | NP_001245851.1 | CHROMO | 374..422 | CDD:237991 | 8/47 (17%) |
Chromo | 458..509 | CDD:278797 | 15/89 (17%) | ||
SNF2_N | 548..829 | CDD:278600 | 127/301 (42%) | ||
DEXDc | 564..709 | CDD:238005 | 65/145 (45%) | ||
Helicase_C | 852..967 | CDD:278689 | 71/114 (62%) | ||
DUF4208 | 1521..1610 | CDD:290618 | |||
DUF3824 | 1795..>1894 | CDD:289625 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467187 | |
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I705 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |