Protein Alignment brm and Chd1l

DIOPT Version :10

• Sequence 1: NP_001261906.1
• Gene: brm / 39744
• FlyBaseID: FBgn0000212
• Length: 1658
• Species: Drosophila melanogaster
• Sequence 2: XP_063137972.1
• Gene: Chd1l / 310707
• RGDID: 1311935
• Length: 1070
• Species: Rattus norvegicus
• Alignment Length: 648
• Identity: 123/648 - (18%)
• Similarity: 218/648 - (33%)
• Gaps: 218/648 - (33%)

  Fly   510 RQKHLEFLAAVLQHGKDLREFHRNNKAQLA----RMNKAVMNHHANAEREQKKEQERIEKERMRR 570
            |.:.:|.:..:|...:.|:....||:.:::    ::|.|::|.:.        .:|.|:||....
  Rat   218 RYRKIEIIPCLLSDHQGLKLVFNNNQGRMSTYTWKLNNALLNDNL--------VKEEIKKEIKNF 274

  Fly   571 LMAEDEEG--YRKLIDQKKDKRLAFLLS-------QTDEYISNLTQMVK------------QHKD 614
            |...:.||  |..|.|..|......|::       |...|:|:||..:|            ..:.
  Rat   275 LEFNENEGTTYPNLWDTMKAVLRGKLIALSACRKKQVRAYVSSLTAHLKALEQKEANTPRRSRRQ 339

  Fly   615 DQMKKKEE----EGKRLIQ---------FKK--------ELLMSG--EYIGI-----DEGSIVAD 651
            :.:|.:.|    |.||.|:         |:|        ..|..|  |.|.|     ::|.|..|
  Rat   340 EIIKLRAEINQVETKRTIERINRTKSWFFEKINKIDKPLARLTRGHRECIQINKIRNEKGDITTD 404

  Fly   652 M-RVHVVEQCTGKKLTGDDAPMLKHLHRWLNMH--PGWDWIDDEEDSCGSNDDHKPK-----VEE 708
            . .:..:.:...|.|.......|:.:..:|:.:  |..    ::|.....|:...||     ::.
  Rat   405 SEEIQKIIRSYYKNLYSTKLENLQEMDNFLDRYQVPKL----NQEQINQLNNPITPKGIEAVIKG 465

  Fly   709 QPTATEDATDKAQATGND---EDAKDLITKA--KVEDDEYRTEEQTYYSIAHTIHEKVVEQASIM 768
            .||......|...|....   ||...:::|.  |:|.|.         |:.:|.:|..:......
  Rat   466 LPTKKSPGPDGFSAEFYQTFIEDLIPILSKLFHKIETDG---------SLPNTFYEATITLIPKP 521

  Fly   769 VNGTLKEYQIKGLEWLVSLYNNNLNGILA-------------DEMG----------LGKTIQTIS 810
            ...|.|:...:.:. |:::....||.|||             |::|          :.|||..|.
  Rat   522 HKDTTKKENFRPIS-LMNIDAKILNEILANRIQEHIKTIIHHDQVGFIPGMQGWFNIRKTINVIH 585

  Fly   811 LVTYL---------------------------MDRKKVMGPYLIIVPL---STLPNWVLEFEKWA 845
            .:..|                           ::|..:.||||.||..   ..:.|..|..|| .
  Rat   586 YIKKLKEQNHMIISLDAEKAFDKIQHPFMIKVLERIGIQGPYLNIVKAIYSKPVANIKLNGEK-L 649

  Fly   846 PAVGVVS--YKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNH 908
            .|:.:.|  .:|.|....|         ||::|......|:.:..:           :|:::...
  Rat   650 EAIPLKSGTREGCPLSPYL---------FNIVLEVLARAIRQQKEV-----------KGNQIGKE 694

  Fly   909 HCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKV 973
            ..|::      ..|...::....| ::...||..|:|           .|.:       ..|.|:
  Rat   695 EVKIS------LFADDMIVYLSDP-KSSTRELLKLIN-----------NFSK-------VAGYKI 734

  Fly   974 ELNEEETILII--RRLHKVLR---PFLL------------------------RRLKKEVEHQL 1007
            ..|:....|..  ::..|.:|   ||::                        :.||||:|..|
  Rat   735 NSNKSVAFLYTKEKQAEKEIRETTPFIIDPNNIKYLGVTLTKQVKDLYNKNFKTLKKEIEEDL 797

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
brm	NP_001261906.1	QLQ	173..202	CDD:462622
		Pro-rich	<247..401	CDD:464580
		PTZ00121	<477..651	CDD:173412	42/193 (22%)
		HSA	501..573	CDD:214727	14/66 (21%)
		BRK	650..691	CDD:462196	6/43 (14%)
		PLN03142	739..>1368	CDD:215601	63/353 (18%)
		Bromo_SNF2L2	1425..1530	CDD:99947
Chd1l	XP_063137972.1	None