| Sequence 1: | NP_001261906.1 | Gene: | brm / 39744 | FlyBaseID: | FBgn0000212 | Length: | 1658 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038953982.1 | Gene: | Chd9 / 307726 | RGDID: | 1306795 | Length: | 2883 | Species: | Rattus norvegicus |
| Alignment Length: | 1988 | Identity: | 495/1988 - (24%) |
|---|---|---|---|
| Similarity: | 770/1988 - (38%) | Gaps: | 526/1988 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 39 QPGP--------LQGPPPPGHPGAYGHPMQHGPPGQGPPGHH-------------MPPHHQGMIF 82
Fly 83 SKGPHMGMQMPPTGPNMSPYQTHGMPPNAPT---QPCIVSPGGP------------PGGPPPPER 132
Fly 133 SSQENLHALQRAIDSMEEKGLQEDPRYSQLLAMRATSKHQHLNGNQVNL------LRTQIT-AYR 190
Fly 191 LLARNKPISMQMQQALQAAQQQPPPGPPI-------GPPGAPGGPPPG----SQHAGQP------ 238
Fly 239 ----PVPPQQQQQPPPSAGTPPQCSTPPASNPYG----PPVPGQKMQVAPPPPHMQQGQPLPPQP 295
Fly 296 PQVGGPPPIQQQQPPQQQQQQSQPPP-----PEP----------HQHQLPNGGKPLSMG-----P 340
Fly 341 SGGQPLIPSSPMQPQVRGTLP-------GMPPGSQV----------------PQPGGGPQRQVPP 382
Fly 383 AGMPMPKPN-------------------------------------RITTVAKPVGLDPITLLQE 410
Fly 411 RENRIAARISLRMQEL--QRLPATMSEDLRLQAAI----ELRALRVLNFQRQLRMEFVQCTRRDT 469
Fly 470 TLETALNIKLYKRTKRQGLREARATEKLEKQQK-------LEAERKRRQKHLEFLA---AVLQHG 524
Fly 525 KDLREFHRNNKAQLARMNKAV--MNHHANAEREQKKEQER----IEK-------ERMRRLMAED- 575
Fly 576 EEGYRKLIDQ-------KKDKRLAFLLSQTDEYI------------SNLTQMVK----QHKDDQM 617
Fly 618 KKKEEEGKRLIQFKKELLMSGEYIGIDEGSIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRWLNM 682
Fly 683 HPGWDWIDDEEDSCGSNDDHKPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVEDDEY---- 743
Fly 744 RTEEQTYYSIAHTIHEKVVEQASIMVNGT-LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ 807
Fly 808 TISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQ-------- 864
Fly 865 NQMR----ATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYR 925
Fly 926 LLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 990
Fly 991 LRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGV-LLTDGSEKGKHGKGGAKAL 1054
Fly 1055 MNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLY-----RVSGKFELLDRILPKLKATN 1114
Fly 1115 HRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGL 1179
Fly 1180 GLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAAARYKLNMDE 1244
Fly 1245 KVIQAGMFDQKSTGSERQQF----LQTILHQDD----NEEEEENEVPDDEMINMMIARSEEEIEI 1301
Fly 1302 FKRMDAERKKEDEEIHPGRE---RLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGS------ 1357
Fly 1358 RQRKEVDYTDSLTEKEWLKAIDDGAEFDEEEEEDDSKRKRRK----------------RKN---- 1402
Fly 1403 --------------RKEESDDDSLILKR----------RRRQNL------------DKRSKK-QM 1430
Fly 1431 HKIMSAVIKHNQDGRTL-----------SEPFMKLPSRQRLPD--YYEIIKRPVDIKKILQRIED 1482
Fly 1483 CKYADL----NELEKDFMQL-CQNAQIY-----NEEASLIYLDSIALQKVFVGA-----RQRITA 1532
Fly 1533 AADAA-----AVAAGDNTGEAHGNGGSDNSDND-------------DDDGGDDGSDDEEIA---- 1575
Fly 1576 -------------TTSAAAVKMK------LKLNKSLASAPATPTQS-----SSNVSSGAATTSKK 1616
Fly 1617 QTRRKRSQKKYTISDDDDDDMDXLPLGVIF--KRGSSD 1652 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| brm | NP_001261906.1 | QLQ | 173..202 | CDD:462622 | 7/35 (20%) |
| Pro-rich | <247..401 | CDD:464580 | 47/237 (20%) | ||
| PTZ00121 | <477..651 | CDD:173412 | 40/220 (18%) | ||
| HSA | 501..573 | CDD:214727 | 21/94 (22%) | ||
| BRK | 650..691 | CDD:462196 | 8/40 (20%) | ||
| PLN03142 | 739..>1368 | CDD:215601 | 246/668 (37%) | ||
| Bromo_SNF2L2 | 1425..1530 | CDD:99947 | 24/133 (18%) | ||
| Chd9 | XP_038953982.1 | KLF3_N | 217..375 | CDD:410554 | 39/168 (23%) |
| PTZ00121 | <510..>765 | CDD:173412 | 54/289 (19%) | ||
| CD1_tandem_CHD5-9_like | 685..749 | CDD:349315 | 9/63 (14%) | ||
| CD2_tandem_CHD5-9_like | 769..827 | CDD:349310 | 18/106 (17%) | ||
| PLN03142 | 858..>1479 | CDD:215601 | 245/659 (37%) | ||
| BRK | 2475..2515 | CDD:462196 | |||
| BRK | 2549..2593 | CDD:197800 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||