Sequence 1: | NP_001261906.1 | Gene: | brm / 39744 | FlyBaseID: | FBgn0000212 | Length: | 1658 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011240739.1 | Gene: | Smarca4 / 20586 | MGIID: | 88192 | Length: | 1670 | Species: | Mus musculus |
Alignment Length: | 1781 | Identity: | 910/1781 - (51%) |
---|---|---|---|
Similarity: | 1126/1781 - (63%) | Gaps: | 290/1781 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MASPSP--ANSPMPPPQ---APSPMAPPSQSPAPSPHSPYPHQQPGPLQGPPPPGHPGAYGHPMQ 60
Fly 61 HGPPGQGPPGHHMPPHHQ-----------------------GMIFSKGPHMGMQMPPTGPNMSPY 102
Fly 103 QTHG----------------MPPNAPTQPCIVSPGGPPGGPPPPERSSQENLHALQRAIDSMEEK 151
Fly 152 GLQEDPRYSQLLAMRATSKHQHLNGNQVNLLRTQITAYRLLARNKPISMQMQQALQAAQQQPPPG 216
Fly 217 -----PPIGPPGAPG-GPPPGSQHAGQPPVPPQQQQQPPPSAGTPPQCSTPPASNPY---GPPVP 272
Fly 273 GQKMQVAPPPPHMQQGQP--LPPQPPQVGGPP------PIQQQQPPQQQQQQSQPPPPEPHQHQL 329
Fly 330 PNGGKPLSMGPSGGQPLIPSSPMQPQVRGTLPGMPPGSQVPQPGGGPQRQVPPAGMPM-PKPNRI 393
Fly 394 TTVAKPVGLDPITLLQERENRIAARISLRMQELQRLPATMSEDLRLQAAIELRALRVLNFQRQLR 458
Fly 459 MEFVQCTRRDTTLETALNIKLYKRTKRQGLREARATEKLEKQQKLEAERKRRQKHLEFLAAVLQH 523
Fly 524 GKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKD 588
Fly 589 KRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRLIQFKKELLMSGE--YIG-----IDEG 646
Fly 647 SIVADMRVHVVEQCTGKKLTGDDAPMLKHLHRWLNMHPGWDWI--DDEEDSCGSNDDHKPKVEEQ 709
Fly 710 PTATEDAT----DKAQATGNDE------DAKDLITKAKVE-DDEYRTEE------QTYYSIAHTI 757
Fly 758 HEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVM 822
Fly 823 GPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVLLTTYEYVIKDKA 887
Fly 888 VLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIF 952
Fly 953 KSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDKVEYIIKC 1017
Fly 1018 DMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHT 1082
Fly 1083 G-GHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDG 1146
Fly 1147 TTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRI 1211
Fly 1212 GQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEE 1276
Fly 1277 --------------------------------EEENEVPDDEMINMMIARSEEEIEIFKRMDAER 1309
Fly 1310 KKEDEEIHPGRERLIDESELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKEW 1374
Fly 1375 ---LKAIDDGAEFDEEEEEDDSKRKRRKRK-------------NRKEESDDDSLILKRRRRQNLD 1423
Fly 1424 KRS------KKQMHKIMSAVIKH--NQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRI 1480
Fly 1481 EDCKYADLNELEKDFMQLCQNAQIYNEEASLIYLDSIALQKVFVGARQRITAAADAAAVAAGDNT 1545
Fly 1546 GEAHGNGGSDNSDNDDDDGGDDGSDDEEIATTSAAAVKMKLKLNKSLASAPATPTQSSSNVSSGA 1610
Fly 1611 ATTSKKQTRRKRSQKKYTISDDDDDD 1636 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
brm | NP_001261906.1 | QLQ | 172..202 | CDD:214931 | 13/29 (45%) |
Drf_FH1 | 251..390 | CDD:283903 | 42/150 (28%) | ||
HSA | 501..573 | CDD:214727 | 47/71 (66%) | ||
BRK | 649..693 | CDD:197800 | 18/45 (40%) | ||
PHA02934 | 687..>824 | CDD:165245 | 75/155 (48%) | ||
SNF2_N | 776..1071 | CDD:278600 | 248/294 (84%) | ||
DEXDc | 793..932 | CDD:238005 | 107/138 (78%) | ||
Helicase_C | 1097..1212 | CDD:278689 | 94/114 (82%) | ||
SnAC | 1304..1375 | CDD:291293 | 38/73 (52%) | ||
Bromo_SNF2L2 | 1425..1530 | CDD:99947 | 63/112 (56%) | ||
Smarca4 | XP_011240739.1 | Med15 | 62..>237 | CDD:312941 | 56/220 (25%) |
QLQ | 191..225 | CDD:370169 | 15/33 (45%) | ||
Smc | <390..>590 | CDD:224117 | 141/199 (71%) | ||
HSA | 481..551 | CDD:369406 | 45/69 (65%) | ||
BRK | 632..676 | CDD:197800 | 17/43 (40%) | ||
DEXHc_SMARCA4 | 751..1001 | CDD:350820 | 202/249 (81%) | ||
PLN03142 | 770..>1252 | CDD:215601 | 395/481 (82%) | ||
SnAC | 1344..1409 | CDD:373166 | 33/64 (52%) | ||
Bromo_SNF2L2 | 1481..1587 | CDD:99947 | 62/105 (59%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 503 | 1.000 | Domainoid score | I340 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0386 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1579 | 1.000 | Inparanoid score | I88 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S727 |
OMA | 1 | 1.010 | - | - | QHG52479 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001147 | |
OrthoInspector | 1 | 1.000 | - | - | oto94394 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101122 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10799 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1363 |
SonicParanoid | 1 | 1.000 | - | - | X702 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.810 |