DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10516 and spsb4b

DIOPT Version :9

Sequence 1:NP_648819.2 Gene:CG10516 / 39738 FlyBaseID:FBgn0036549 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001003474.1 Gene:spsb4b / 445080 ZFINID:ZDB-GENE-040801-213 Length:281 Species:Danio rerio


Alignment Length:210 Identity:59/210 - (28%)
Similarity:87/210 - (41%) Gaps:40/210 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WHATDES-DAVVTDRD-IIF--HPTYSQGTAIVRGEQALKTNMVHFWEMRVITTLAGTDVMFGIG 113
            |:..|.| :..:.|.| :.|  ||. :|.|..|||:... |..:|.|.:|......||..:.|:.
Zfish    59 WNPDDRSPNLFIKDDDRLTFHRHPV-AQSTDCVRGKTGF-TRGLHAWSLRWPVRQRGTHAVVGVA 121

  Fly   114 TESVNLGQFKFHFVSAL-GTNAQSWGFSYS-GRIQH-----CGELLPYGQ---------KFSQGC 162
            |....|....:   ||| |::|:|||:... ||:.|     .|...||.:         .||...
Zfish   122 TSLATLRAVGY---SALVGSDAESWGWDLGRGRLYHDRKSRSGPAPPYPEFVEDEDEEGTFSVPE 183

  Fly   163 LIGVCLDRTRGHLEFYLNRRSLGVAYTNVPTDPDVKIYPMVCSTAAKSVIRLINCTSQPVTLQLR 227
            .|.|.||...|.|.|..:...||||:..:   ...::||:|.:...       :|     .:.:.
Zfish   184 EILVVLDMDEGTLGFCADGNYLGVAFRGL---KGKRLYPIVSAVWG-------HC-----EVSMN 233

  Fly   228 SFQALSRQPLKLAEL 242
            ....|..:||.|.||
Zfish   234 YINGLDPEPLPLMEL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10516NP_648819.2 SPRY_SOCS3 51..233 CDD:293936 53/199 (27%)
spsb4bNP_001003474.1 SPRY_SOCS1-2-4 57..235 CDD:293963 53/195 (27%)
SOCS_SSB4 240..281 CDD:239712 5/9 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.