DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10516 and Spsb2

DIOPT Version :9

Sequence 1:NP_648819.2 Gene:CG10516 / 39738 FlyBaseID:FBgn0036549 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001009660.1 Gene:Spsb2 / 297592 RGDID:1310854 Length:264 Species:Rattus norvegicus


Alignment Length:174 Identity:43/174 - (24%)
Similarity:76/174 - (43%) Gaps:19/174 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WHATDESDAV-VTDRDIIF--HPTYSQGTAIVRGEQALKTNMVHFWEMRVITTLAGTDVMFGIGT 114
            |:..|.|:.: |.:..:.|  .|. :|.|..|||::.....: |.||:.......||..:.|:.|
  Rat    48 WNPKDCSENIDVKEGGLCFERRPV-AQSTDGVRGKRGYSRGL-HAWEISWPLEQRGTHAVVGVAT 110

  Fly   115 ESVNLGQFKFHFVSALGTNAQSWGFSYS-GRIQHCGELL--------PYGQKFSQGCLIGVCLDR 170
            ....|.  ..|:.:.||:|::|||:... |::.|..:.|        |.|::......:.|.||.
  Rat   111 ALAPLQ--ADHYAALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDM 173

  Fly   171 TRGHLEFYLNRRSLGVAYTNVPTDPDVKIYPMVCSTAAKSVIRL 214
            ..|.|.:.:....||.|:..:   ....:||.|.:...:..:|:
  Rat   174 EEGTLGYSIGGTYLGPAFRGL---KGRTLYPSVSAVWGQCQVRI 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10516NP_648819.2 SPRY_SOCS3 51..233 CDD:293936 43/174 (25%)
Spsb2NP_001009660.1 SPRY_SOCS1-2-4 46..217 CDD:293963 43/174 (25%)
SOCS_SSB2 223..264 CDD:239689
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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