DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(3)72Ab and obe

DIOPT Version :9

Sequence 1:NP_648818.3 Gene:l(3)72Ab / 39737 FlyBaseID:FBgn0263599 Length:2142 Species:Drosophila melanogaster
Sequence 2:NP_650472.2 Gene:obe / 41891 FlyBaseID:FBgn0038344 Length:2183 Species:Drosophila melanogaster


Alignment Length:2243 Identity:811/2243 - (36%)
Similarity:1251/2243 - (55%) Gaps:272/2243 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TKPEKTEERKVKR-------QKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVL 116
            |..:..||:.:.|       :|:..|:...::::..      :.|.:|.      :|..|..|..
  Fly    40 TNSQNKEEQTIARLLAQMPTEKQPAAKVQLQKLRNL------VQECMGY------EEQPQVVEHA 92

  Fly   117 LSFIQEALGDQPRDILCGAADEILAVLKNDRLK-------DRERKKDIDSLLGAVTDERFALLVN 174
            ..|:...|.||          .:|.|....||.       || :|..|...:.|:          
  Fly    93 ALFLFWLLLDQ----------RVLLVATTQRLHGMFGQTFDR-KKTQIHDCVQAI---------- 136

  Fly   175 LGKKITDFGSDAVNALTAAPNNEEQIDETYGINVQFEESEEE-SDNDMYGEIRDDDAQDEG--EE 236
             |..:.|....|:.......:....:...:|.::..:.:..| .|..:..::..|......  .:
  Fly   137 -GDLLEDHERSALKRWRQTHHKVPGVGPLWGAHIHVKCTPSEWMDISLLTDLAPDALLKNRTVNK 200

  Fly   237 ARIDHTLHAENLA--NEEAANNVKKERSLHPLDIDAYWLQRCLSKFYKDAMVSQSKAADVLKILK 299
            ..:.||..|..:|  :.|||....:.::|  |:|.|......|.....|.:.|| ::::||    
  Fly   201 FSMKHTTKAAPVASTSSEAAKLSPELQTL--LEISAKLDDEHLIIRVGDILGSQ-RSSEVL---- 258

  Fly   300 DAADDRDCENQLVLLLGYDCFDFIKQL-----KLNRQMVLYCT---------------------- 337
                    :|:|:.:||:|.|:.:::|     |:.||:..:.|                      
  Fly   259 --------QNELMEILGFDYFELVEKLLMERDKIARQLDQFATRSRRVMEVKQKRMEAAASGGAA 315

  Fly   338 ----MLASA---QTDSERQRIREKMRGNSALAKILRQLDTGKSEDQEEGEARGSKRGKGDAEDGG 395
                .:|||   |:..|:|..:.:.|....|.:|:|.:...::||                 |..
  Fly   316 ERRPTVASAVVVQSAQEKQLSKMQRREEKKLQRIMRSIKDEEAED-----------------DPN 363

  Fly   396 AAAAGQVAGV-----RQLL-----------------ELEEMAFTQGSH----------------F 422
            .|.|..|..:     |:||                 |.::.::.|..|                |
  Fly   364 CAVAVSVQQLRMQHQRKLLEAAQREPLLLSTKAAKAEYKQSSYNQPIHYPYVFDSQLLAKQHAGF 428

  Fly   423 MANKRCQLPDGSYRKQRKGYEEVHVPALKPVPFDANEELQPVDKLPKYVQPVFEGFKTLNRIQSR 487
            :...|..|||.:.|...|.:|||.:||.:|.|.....:...:::|....:..|...|.||||||.
  Fly   429 IGGSRITLPDNAQRIDNKQWEEVKIPASEPPPLSVGNKRVQIEELDDVGRLAFANCKELNRIQSV 493

  Fly   488 LYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQEMV 552
            ::..|..|:||||:||||||||||||:|:::..|..|: |.|.||..:|||:|:||||:|..|||
  Fly   494 VFPVAYHSNENMLVCAPTGAGKTNVAMLSIVHTIRCHL-EQGVINRDEFKIVYIAPMKALAAEMV 557

  Fly   553 GNFGRRLACYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG-GERTFVSLVRLVIIDE 616
            .||.:||....:.|.|||||.|||:.::||||::|.||||||::|||| |:...:|||.|:||||
  Fly   558 DNFSKRLKSLQIAVRELTGDIQLTKAEMAATQILVTTPEKWDVVTRKGSGDVALISLVELLIIDE 622

  Fly   617 IHLLHDERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYR 681
            :||||.|||||:|||||||:|.:|::|..:|:||||||||||.|||.||||.|.|||||||:.:|
  Fly   623 VHLLHGERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLFYFDSRFR 687

  Fly   682 PVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGR-NQVLVFVHSRKETGKTARAVRDMCLEQ 745
            ||.|:..::|:...|.|::...|::..|:|.:|.... :|::||||:|..|.:||..:|::..:.
  Fly   688 PVPLDTNFVGIKSVKQLQQIADMDQCCYQKCVEMVQEGHQIMVFVHARNATVRTANVIRELAQQN 752

  Fly   746 DTLGSFLKEGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLV 810
            :|...||.:.||:..:.....::.:|.:|.||...|.|:|||||.|.||.:||..|.:.||.|||
  Fly   753 NTSALFLPKDSAAHGLATRSIQRSRNKQLVELFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLV 817

  Fly   811 STATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSE 875
            .|||||||||||||.|||:||.:|:.:.|.:|:|..|||||:.|||||||:|..|.|.:||::.:
  Fly   818 CTATLAWGVNLPAHAVIIRGTDIYDAKHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDK 882

  Fly   876 LQFYLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSH 940
            |..|||||..|.||||.|::.|.|.|||||.|||:.::.:|:.||.||||::||..||.:||:.:
  Fly   883 LNHYLSLLTNQFPIESNFVNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYGIEY 947

  Fly   941 DAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRIASHYYLTHETMLTYNQLL 1005
            ..::.||.||..|..|:.:||..|:::.:::::::|....:|||||.||::|:.::|:.|:|:|:
  Fly   948 SELEKDPTLEARRRALIMSAAMSLDKARMMRFNQRTMDMNITDLGRTASYFYIKYDTVETFNELM 1012

  Fly  1006 KQTLSEIELFRVFSLSSEFRHISVREEEKLELQKLMERV----PIPIKESIEEHSAKVNVLLQAY 1066
            |..:::.|:..:.|.:.||:.:.||::|..||.:|....    |....|::.   .|||:|:|.|
  Fly  1013 KPFMTQAEILAMISQAQEFQQLKVRDDEMEELDELKNAYCKIKPYGGSENVH---GKVNILIQTY 1074

  Fly  1067 ISQLKLEGFALMSDMVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQ 1131
            :|...::.|:|.|||.:||.:..|:.||:|.|||.:..|.|:...|.||||.:||.|.....|:|
  Fly  1075 LSNGYVKSFSLSSDMSYITTNIGRISRALFSIVLRQNNAVLSGNMLQLCKMFERRQWDFDCHLKQ 1139

  Fly  1132 FKKMPDEIAKKLEKKHFPWGRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRG 1196
            |..:..|...|||::.....||.|:|..||.|.:|.......:.:..|:.|.||:...:|||||.
  Fly  1140 FPTINAETIDKLERRGLSVYRLRDMEHRELKEWLRSNTYADLVIRSAHELPLLEVEASLQPITRT 1204

  Fly  1197 TLRVELTITPDFQWDEKVHGQS-EGFWVLIEDVDSELILHHEFFLLKQK--YSQDEHQLKFFVPV 1258
            .||:::.|.|.|.|:::|||:: :.||:.|||.:|..|.|.|.|.:.:|  .|....||...:|:
  Fly  1205 VLRIKVDIWPSFTWNDRVHGKTCQSFWLWIEDPESNYIYHSELFQVTRKLVMSGQSQQLVMTIPL 1269

  Fly  1259 FEPLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNMPPTELLDLQPLPISALRQPKFESFYSQ 1323
            .|||||||::|:.||.|:|:.|.:|:||:||:|||.:.|.||||.|:|||:|.|:...:||.|  
  Fly  1270 KEPLPPQYYIRVSSDNWLGSTTCIPLSFQHLVLPEHHPPLTELLPLRPLPVSCLKNVVYESLY-- 1332

  Fly  1324 RFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQSDARCVYLVSEEALADL 1388
            :|..|||||||:|:.:|::|.||.:||||||||..:||.||.|........:.||:...:||...
  Fly  1333 KFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIVAEIAIFRALNQNPKCKVVYIAPLKALVKE 1397

  Fly  1389 VFADWHSKF--GSLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQRKNVQLVNLFI 1451
            ..|||..:|  .||.:|||:|||:...|::.|.:.||::||.:|||.:||.|:.|:.||.|:|.:
  Fly  1398 RIADWEQRFQRSSLGLKVVELTGDVTPDIQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIV 1462

  Fly  1452 VDELQLVGGEEGPVLEIVCSRMRYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPS 1516
            :||:.|:|.:.|||:|::.||..:|||...:.||||.||.:|.:|:|:|.|||.|....:||.||
  Fly  1463 IDEIHLLGEDRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGINKMGLYNFKPS 1527

  Fly  1517 VRPIPLELHIQGYNVTHNATRIATMSKPVYNAILKYSAHKPVIVFVSSRKQARLTAIDVLTYAAS 1581
            |||:||::||.|:...|...|:|||::|.:.||..||..:|.|||||||:|.||||:|::|:.|.
  Fly  1528 VRPVPLQVHINGFPGKHYCPRMATMNRPTFQAIRTYSPCEPTIVFVSSRRQTRLTALDLITFVAG 1592

  Fly  1582 DLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLHEGLSASDHRLVEQLFDSGAVQVAVIS 1646
            :..|.:|.|..|::|:..|:.:.::.||..||.|:...|.||...|.:.||:||.:..:|:.|.:
  Fly  1593 ESNPKQFLHIPEDEIELILQNIREQNLKFCLAFGIGLHHAGLQEQDRKCVEELFLNRKIQILVAT 1657

  Fly  1647 RDLCWGMSISAHLVIIMDTQFYNGKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKD 1711
            ..|.||:::.||||:|..|::::||...|.|.||||||||:|||.||..|.:...|::....||:
  Fly  1658 ATLAWGVNLPAHLVVIKGTEYFDGKVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDEKKN 1722

  Fly  1712 FFKKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVT 1776
            |:|||:.:|.|:||.|...:.:|.|||:|..|:::||.|:||||||:.:|||.:||:||.||.:.
  Fly  1723 FYKKFLYDPFPVESSLLGVLPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQDIE 1787

  Fly  1777 HRHLSDHLSELVENTLSDLEQSKCISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKV 1841
            ..::::.:|.|||..:.:|..:.|: ||.|...:|..||.|::|||::|.|::.|...|......
  Fly  1788 PENVNNFMSNLVERVVYELSAAACL-VERDGCLIPTFLGRISSYYYLSYRTMKHFLEDLQPGMNT 1851

  Fly  1842 RGLLEIISSAAEYEDVVVRH----HEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAH 1902
            :.:|..|:.:.|::.:.|||    |.|::......|.|:.         .::..:.||.||||||
  Fly  1852 KKVLLAIADSYEFDQLPVRHNEDKHNEEMAEVSRFRPPSS---------SWDSSYTKTFLLLQAH 1907

  Fly  1903 LSRLQL-GPELQGDTEQILSKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMW-------- 1958
            .:|..| ..:...||:..|..|.|::||.||..:..||||..:...:|.|.|.||.|        
  Fly  1908 FARQSLPNSDYLTDTKSALDNATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQARWFDGSEFLT 1972

  Fly  1959 -------SKDSYLKQLPHFS------PEIVKRC---------------TEKKIETVFDIME---- 1991
                   :.|::| .:||..      |.:.:.|               .|.:||.::.:::    
  Fly  1973 LPGVNEDNLDAFL-NIPHDDYDYLTLPVLKELCKQEYEVLAKPLRDAFEEHEIEKMYKVIQDLPE 2036

  Fly  1992 -----------LEDEDRTRLLQLSDLQMADVARFCNRYPNIELNYEVVDKDRINSGSTVNVVVQL 2045
                       :|:|...|.|.|||....:       :.::..|.:.|            ::|.|
  Fly  2037 IAIQIFVEGRHMENEYAKRPLSLSDDTRGE-------WMSLHANEDYV------------LIVNL 2082

  Fly  2046 EREDEVTG---------PVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQ-QKAKVKLDFVA 2100
            :|.: |:|         .|..|.:|:.:.|.|::.:|....:.||::||:::: |:...::.|.|
  Fly  2083 QRLN-VSGQRRGGGQSYTVHCPKYPKPKNEAWFLTLGSQANDELLAMKRVSIRGQRCTNRISFQA 2146

  Fly  2101 -PSPGKHDYTLYYMSDSYLGCDQEYKFSIEVGD 2132
             |..|:...|||.|||..:|.||:|....|:.|
  Fly  2147 TPRLGRLQLTLYLMSDCLMGFDQQYDLQFEIID 2179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72AbNP_648818.3 BRR2 466..1241 CDD:224125 359/781 (46%)
DEAD 482..661 CDD:278688 109/179 (61%)
HELICc 773..859 CDD:197757 52/85 (61%)
Sec63 982..1285 CDD:280962 118/309 (38%)
DEXDc 1320..1506 CDD:214692 86/187 (46%)
DEAD 1329..1495 CDD:278688 77/167 (46%)
HELICc 1615..1694 CDD:197757 36/78 (46%)
Sec63 1811..2127 CDD:280962 98/382 (26%)
obeNP_650472.2 BRR2 450..1254 CDD:224125 365/807 (45%)
DEAD 488..666 CDD:278688 109/178 (61%)
HELICc 790..866 CDD:197757 48/75 (64%)
Sec63 989..1296 CDD:280962 118/309 (38%)
DEXDc 1332..1532 CDD:214692 94/201 (47%)
DEAD 1338..1510 CDD:278688 78/171 (46%)
HELICc 1605..1704 CDD:197757 41/98 (42%)
SEC63 1818..2176 CDD:214744 98/387 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466316
Domainoid 1 1.000 58 1.000 Domainoid score I607
eggNOG 1 0.900 - - E1_COG1204
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D154891at2759
OrthoFinder 1 1.000 - - FOG0001085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100305
Panther 1 1.100 - - P PTHR24075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.750

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