Sequence 1: | NP_648818.3 | Gene: | l(3)72Ab / 39737 | FlyBaseID: | FBgn0263599 | Length: | 2142 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524333.1 | Gene: | DNApol-theta / 41571 | FlyBaseID: | FBgn0002905 | Length: | 2059 | Species: | Drosophila melanogaster |
Alignment Length: | 2331 | Identity: | 439/2331 - (18%) |
---|---|---|---|
Similarity: | 829/2331 - (35%) | Gaps: | 771/2331 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 230 AQDEGEEARIDHTLHAE----NLANEEAANNVKKERSLHPLDIDAYWLQRCLSKFYKDAM---VS 287
Fly 288 QS-KAADVLKILKDAADDRDCENQLVLLLGYDCFDFIKQLKLNRQMVLYCTMLASAQTDSERQRI 351
Fly 352 REK--MRGNSALAKILRQLDTGKSEDQEEGEARGSKRGKGDAEDGGAAAAGQVAGVRQLLELEEM 414
Fly 415 AFTQGSHFMANKRCQLPDGSYRKQRKGYEEVHVPALKPVPFDANEELQPVD--KLPKYVQPVFEG 477
Fly 478 FKTLNRIQSR---LYKAALDSDE-NMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQDFKI 538
Fly 539 IYVAPMKSLVQEMVGNFGRRLACYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKGGER 603
Fly 604 TFVSLVRLVIIDEIHLLHDE-RGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRV 667
Fly 668 KPDKGLFYFDNSYRPVSLEQQYIGVTEKKALK--------RFQVMNEIVYEKTMEHAGRN----- 719
Fly 720 ------------QVLVFVHSR----KETGKTARAVRDMCLEQDTLGSFLKEGSASMEVLRTEAEQ 768
Fly 769 VKNTE------LKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVI 827
Fly 828 IKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNH-----------SELQFYLS 881
Fly 882 LLNQQ---------LPIESQFISKLPD---------MLNAEIVL----------GTVQHLQDAVN 918
Fly 919 WLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTA----ACCLERS-----GLIKYD- 973
Fly 974 -RKTGHFQVTDLGRIASH--------YYLTHETMLTYNQLLKQTLSEI-ELFRVFSLSSEFRHIS 1028
Fly 1029 VREEEKLE---------------LQKLMERVPIPI-----------KESIEEHSAKVNVLLQAYI 1067
Fly 1068 SQLKLEGFAL----------------MSDMVFITQSAARLMRAIFEIVLTRGWAQLAD-KTLTLC 1115
Fly 1116 KMIDRRMWQSMTPLRQF-KKMPDEIAKKLEKKHF----------------PWGRLYDLEPHELGE 1163
Fly 1164 LIRVPKLG-----------KTIHKFVHQFPKLELSTHI---QPITRGTLRVELTITPDFQWD--- 1211
Fly 1212 EKVHGQSEGFWV------------LIEDVDSE------LILHHEFFLLKQKYSQDEHQLKFFVPV 1258
Fly 1259 FEPLPPQYFLRIVSD----RWIGAETQ-LPVSFRHLI----LPEKNMPPTE-------------- 1300
Fly 1301 -----LLDLQ----------PLPISALRQPKFES-------------------FYSQRFPQFNP- 1330
Fly 1331 IQTQVFNA-------VYNSDENVFVG-----APTG-SGKMTIAEFAI------------------ 1364
Fly 1365 -----------------MRLFTTQSDA----RCVYL----------VSEEALADLVFA------- 1391
Fly 1392 ---------------DWHSKFGSLDI------------KVVKLTGET------------GTDLKL 1417
Fly 1418 IAKGQLV--ITTADKWDVLSRR--------------------------WKQR------------- 1441
Fly 1442 -KNVQLVNLFIVDELQLV---GGEEGPVLEIVCSRMRYISSQIEKQIRIVALSASLTDARDVAQW 1502
Fly 1503 LGCNPNATFNFHPSVRPIPLE----LHIQGYNVTHNATRIATMSKPVYNAIL---KYSAHKPVIV 1560
Fly 1561 FVSSRKQARLTAI---DVLTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLHEG 1622
Fly 1623 LSASDHRLVEQLFDSGAVQVAVISRDLCWGMSISAHLVIIMDTQFYNGKNHSYEDYPITDVLQMI 1687
Fly 1688 GRANRPNEDADAKCVLMCQSSK------KDFFKKFINEPLPIESH--LDHRMHDHFNAEVVTKTI 1744
Fly 1745 ENKQ-DAV--DYLTWTFLYRRLTQNPNYYNLQGVTHRHL----SD--HLSELVENTLSDLEQSKC 1800
Fly 1801 ISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVRHHEEQ 1865
Fly 1866 VLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRL---QLGPELQGDTEQILSKAIRLI 1927
Fly 1928 QACVDVLSSNGWLSPAVA---AMELAQMVT----QAMWSKDSYLKQLPHF--SPEIVKRCTEKK- 1982
Fly 1983 -IETV-FDIMELEDEDRTRLLQLSDLQ--MADVARFCNRYPNIELNYEVVDKDRINSGSTVNVVV 2043
Fly 2044 QLERE---DEVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKL 2096 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(3)72Ab | NP_648818.3 | BRR2 | 466..1241 | CDD:224125 | 201/968 (21%) |
DEAD | 482..661 | CDD:278688 | 48/183 (26%) | ||
HELICc | 773..859 | CDD:197757 | 34/91 (37%) | ||
Sec63 | 982..1285 | CDD:280962 | 64/411 (16%) | ||
DEXDc | 1320..1506 | CDD:214692 | 56/339 (17%) | ||
DEAD | 1329..1495 | CDD:278688 | 49/319 (15%) | ||
HELICc | 1615..1694 | CDD:197757 | 14/78 (18%) | ||
Sec63 | 1811..2127 | CDD:280962 | 49/306 (16%) | ||
DNApol-theta | NP_524333.1 | BRR2 | 209..978 | CDD:224125 | 178/823 (22%) |
DEAD | 251..404 | CDD:278688 | 45/163 (28%) | ||
HELICc | 542..616 | CDD:197757 | 35/79 (44%) | ||
PolA | 1489..2055 | CDD:223820 | 137/736 (19%) | ||
DNA_pol_A_theta | 1668..2053 | CDD:176475 | 93/512 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45466308 | |
Domainoid | 1 | 1.000 | 45 | 1.000 | Domainoid score | I721 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |