DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)72Ab and Y54E2A.4

DIOPT Version :9

Sequence 1:NP_648818.3 Gene:l(3)72Ab / 39737 FlyBaseID:FBgn0263599 Length:2142 Species:Drosophila melanogaster
Sequence 2:NP_497060.2 Gene:Y54E2A.4 / 190256 WormBaseID:WBGene00013189 Length:2017 Species:Caenorhabditis elegans


Alignment Length:1980 Identity:717/1980 - (36%)
Similarity:1127/1980 - (56%) Gaps:172/1980 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 FYKDAMVSQSKAADVLKILKDAADDRDCENQLVLLLGYDCFDFIKQLKLNRQMVLY--------- 335
            ::.|...:.|:  ::|::|.....|.|.:.:|:.|||.:.|:....:...|..:::         
 Worm    80 YFPDTFETISQ--NLLQMLCSTRSDMDLQGELIDLLGVELFELAGDILEKRNKIVFEVKSQELAK 142

  Fly   336 -------------------CTMLASAQTDSERQRIREKMRGNSALAKILR--------QLDTGKS 373
                               .::.:::|.:..|:..:|:.|....|.:::.        :|:..:.
 Worm   143 VEHARQAKAKPAVPGFLQTVSVQSTSQNEKRRELRKEEKRTRRELNRVIHAFGDEEKLELELAQK 207

  Fly   374 EDQEEGEAR-GSKRGKGDAEDGGAA----------AAGQVAGVRQLLELEEMAFTQGSHFMANKR 427
            |.|.:.:.. ...:.|.....||..          |..|..| ..:.::..|.|.          
 Worm   208 EIQRQRQLEIDQMKWKPSLVAGGPRIEEIYPYVFDARLQNVG-HTMFDINGMKFA---------- 261

  Fly   428 CQLPDGSYRKQRKGYEEVHVPALKPVPFDANEELQPVDKLPKYV-------QPVFEGFKTLNRIQ 485
              ||:||.|...|.:|.|:||   |......|::|.|     ||       |..|:||:.||.||
 Worm   262 --LPEGSKRDTFKTHESVYVP---PSNKGDIEKIQHV-----YVKDMDELGQKGFKGFEKLNVIQ 316

  Fly   486 SRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQE 550
            |.:::.|..:.||:|:||||||||||:|:||::..|.:|.|..|.|...||||||:||||:|..|
 Worm   317 SIVFEQAYKTKENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATE 381

  Fly   551 MVGNFGRRLACYNLTVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG-GERTFVSLVRLVII 614
            |..:||:|||...|.|.|||||.||:|.::|.||::|.||||||:||||. .:.:.:::|||:||
 Worm   382 MTESFGKRLAPLGLKVKELTGDTQLSRNEVADTQMLVLTPEKWDVITRKSTSDNSLINVVRLLII 446

  Fly   615 DEIHLLHDERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNS 679
            ||:||||||||||:|.|||||:|.:|.:|..:|:|||||||||:.|||.||||.|.||||:||..
 Worm   447 DEVHLLHDERGPVIETLVARTLRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLFFFDGR 511

  Fly   680 YRPVSLEQQYIGVTEKKALKR--FQVMNEIVYEKTMEHAGR-NQVLVFVHSRKETGKTARAVRDM 741
            :|||.|.|::|| |.|....|  ..:|:.:.|::.::...| :|||||||:|..|.|...|   .
 Worm   512 FRPVPLTQKFIG-TRKAGNFRDNLTLMDNVCYDEVVDFVKRGHQVLVFVHTRNGTAKLGEA---F 572

  Fly   742 CLEQDTLGS---FLKEGSASMEVLRTEAEQVKN-----TELKELLPYGFAIHHAGMTRVDRTLVE 798
            |.....||.   ||.:..||.:.:  :|::..|     .::..|...|..|||||:.|.||.|:|
 Worm   573 CARASVLGQMDLFLPKDRASSKYI--QADKAINICRNRAQISPLFQRGMGIHHAGLCRQDRILME 635

  Fly   799 DLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDT 863
            ..||:.|:.||..|||||||||||||.|:||||.|::.|||.:.:|..|||.|:.|||||||::.
 Worm   636 RCFAEGHVSVLFCTATLAWGVNLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQIFGRAGRPQFEN 700

  Fly   864 KGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIR 928
            :|.||:||...::..||::|..|.||||||.::|.|.||||:.||||..:.:.|.||.|||:|.|
 Worm   701 EGHGIIITTRDKIDKYLTMLVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGVEWLTYTYMYTR 765

  Fly   929 MLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRIASHYYL 993
            .|:||..||::::||:.||.|..|..:::..||..|:::.:|::|..|.:...||||||||::|:
 Worm   766 ALKNPMAYGIAYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATEYLNSTDLGRIASNFYV 830

  Fly   994 THETMLTYNQLLK---------QTLSEIELFRVFSLSSEFRHISVREEEKLELQKLME-RVPIPI 1048
            .:||:...|:..|         ..:.:..:..:.|:|:||.::..||||..:|::||. ...:.:
 Worm   831 KYETIQLLNEAEKGVGLPVTFTSFMPDDMVIGLISMSTEFANLKCREEEIGDLEELMSYGCMMNV 895

  Fly  1049 K-ESIEEHSAKVNVLLQAYISQLKLEGFALMSDMVFITQSAARLMRAIFEIVLTRGWAQLADKTL 1112
            : ..:...:.|||||||:.||:......||||:.:::.|:|.||.||:||:||..||:|.|:..|
 Worm   896 RGGGLASVAGKVNVLLQSLISRTSTRNSALMSEQLYVQQNAGRLCRAMFEMVLKNGWSQAANAFL 960

  Fly  1113 TLCKMIDRRMWQSMTPLRQFKK---MPDEIAKKLEKKHFPWGRLYDLEPHELGELIRVPKLGKTI 1174
            .:.|.::::||.:...||||.:   :|....:|:|:|......|.:|...:||.:....  |..:
 Worm   961 GIAKCVEKQMWMNQCALRQFIQIINIPITWIEKIERKKARESDLLELSAKDLGYMFSCD--GDRL 1023

  Fly  1175 HKFVHQFPKLELSTHIQPITRGTLRVELTITPDFQWDEKVHGQS--EGFWVLIEDVDSELILHHE 1237
            :.::...|::::....:|||...::||:|:||.|.|::::||:|  :.|::::|:::..||:|.|
 Worm  1024 YTYLRYLPRMDVQAKFKPITYTIVQVEVTLTPTFIWNDQIHGKSGQQSFYLVLENLNENLIIHQE 1088

  Fly  1238 -FFLLKQKYSQDEHQ-LKFFVPVFE-PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNMPPT 1299
             ..:.|.|.::.|.| |.|.:|:.: .|...:.||:.|:.::..:..:|:|..:.|||:.....|
 Worm  1089 RIGIGKMKVNRQETQNLVFTIPIVDCQLTNNFQLRLASEYFVTDDVVVPMSLHNCILPKSFKSHT 1153

  Fly  1300 ELLDLQPLPISALRQPKFESFYSQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAI 1364
            :||||:||||..|:..|||:.|:  |..|||||.|||..:|.:|::..:||||||||...||.|:
 Worm  1154 DLLDLEPLPIKTLKNSKFEAIYN--FDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAM 1216

  Fly  1365 MRLFTTQSDARCVYLVSEEALADLVFADWHSKF-GSLDIKVVKLTGETGTDLKLIAKGQLVITTA 1428
            .||.......:.||:...::|......||..|| ..:..:||:::|:...|.:.:|...::|||.
 Worm  1217 FRLLQDHPGMKVVYIAPLKSLVRERVDDWKKKFEDGMGYRVVEVSGDVTPDPEELAASSILITTP 1281

  Fly  1429 DKWDVLSRRWKQRKNVQLVNLFIVDELQLVGGEEGPVLEIVCSRMRYI---SSQIEKQIRIVALS 1490
            :|||.:||.|..|:.|:.|.|.::||:.|:|.:.|.|||.:.||::.|   |...|:.:|::.||
 Worm  1282 EKWDGISRSWATREYVRRVGLIVLDEVHLLGVDRGAVLEAIVSRLKMITRRSHVTEEPVRLLGLS 1346

  Fly  1491 ASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQGYNVTHNATRIATMSKPVYNAILKYSAH 1555
            .:|.:|.|||:|||....|.:||.|||||:|:.:||||:...|...|:..|:||.|.|||.||..
 Worm  1347 TALANAGDVAEWLGIPDEACYNFRPSVRPVPISVHIQGFPGQHYCPRMGLMNKPAYKAILTYSPR 1411

  Fly  1556 KPVIVFVSSRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLH 1620
            |||::|||||:|.||||:..:....:|..|.::.:.:..:::..:..:.|:.||.||..|:...|
 Worm  1412 KPVLIFVSSRRQTRLTALAFVNLLIADHNPKQWLNMDMLELEDLMAAIKDENLKLTLPFGIGMHH 1476

  Fly  1621 EGLSASDHRLVEQLFDSGAVQVAVISRDLCWGMSISAHLVIIMDTQFYNGKNHSYEDYPITDVLQ 1685
            .||||.:..:|||||....:||.:.:..|.||::..|||||:..|::::||...|.|:|:|||||
 Worm  1477 AGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQ 1541

  Fly  1686 MIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDA 1750
            |:|||.||..|..|..|:..|.:||.|:|||:.||.|:||.|...:.:|.|||:...||::||..
 Worm  1542 MMGRAGRPQFDDSAVAVIYVQDAKKTFYKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAI 1606

  Fly  1751 VDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISVEDDMDTL-PLNL 1814
            |:||:.|:|||||..|||||.|:..:...:...::::|::::::|..|:||.|:.:.|.: |...
 Worm  1607 VEYLSKTYLYRRLFANPNYYGLEEDSEEAMLKFITKIVDDSVAELLASECIHVDSEQDVIKPTPC 1671

  Fly  1815 GMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVRHHEEQVLRTLSQRLPNKLT 1879
            |.||:.||:.:.|:.....||:|...|..:|:|::...||.::.|||:|:.:...|.::|..:. 
 Worm  1672 GRIASVYYLQHETVRFLVKSLHSGCSVENMLKILTDVPEYAEIPVRHNEDLINTELQKKLRIRF- 1735

  Fly  1880 GPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQILSKAIRLIQACVDVLSSNGWLSPAV 1944
                :.........|.:||.|||..|..|..:.:.|.:.:|.:.||::||..::.....|||..:
 Worm  1736 ----STSVMGTSACKAHLLFQAHFMRTVLPTDYRTDLKSVLDQCIRILQAMREMARLKNWLSATM 1796

  Fly  1945 AAMELAQMVTQAMWSKDSYLKQLPHFSPE----IVKRCTEKKIETVFDI---MELEDEDRTRLLQ 2002
            ..:.|.||...|.|..|..|..|||.|.|    |....|..:::...:|   ..|:|....|..|
 Worm  1797 NIILLQQMCHSARWHDDHPLLCLPHLSHEDARSIGDGMTIPQLQNHLEIEKSTSLDDAKLARRAQ 1861

  Fly  2003 --------LSDLQMADVAR-FCNRYPNIELNY--------EVVDKD------RINSGSTVNVVVQ 2044
                    |.:.|..:|.: .|| :|.|.:..        ..||.|      ::.:|....:.:.
 Worm  1862 KLFRECTKLDEAQSREVLKALCN-WPIINMKIMQLVDSRGNCVDIDETKKPVKVTAGEVYKLRIV 1925

  Fly  2045 LEREDEVTGP------VIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLT--LQQKAKVKLDFVAP 2101
            :||    .||      :..|.:|:.::.||.:|:|:...:.:|:...:|  ...::..|||..||
 Worm  1926 MER----VGPGKNNSSMHLPQWPKPKQAGWIIVVGNVSADMILNTTTVTGSHSTRSTAKLDIRAP 1986

  Fly  2102 -SPGKHDYTLYYMSDSYLGCDQEYKFSIEV 2130
             :.|.|:..:..:||.|||.||||...::|
 Worm  1987 ATKGNHELAVLILSDCYLGIDQEYTLRLDV 2016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72AbNP_648818.3 BRR2 466..1241 CDD:224125 347/810 (43%)
DEAD 482..661 CDD:278688 104/179 (58%)
HELICc 773..859 CDD:197757 48/85 (56%)
Sec63 982..1285 CDD:280962 100/321 (31%)
DEXDc 1320..1506 CDD:214692 74/189 (39%)
DEAD 1329..1495 CDD:278688 64/169 (38%)
HELICc 1615..1694 CDD:197757 37/78 (47%)
Sec63 1811..2127 CDD:280962 96/354 (27%)
Y54E2A.4NP_497060.2 BRR2 307..1065 CDD:224125 334/765 (44%)
BRR2 1177..1799 CDD:224125 239/626 (38%)
DEXHc_ASCC3_2 1179..1370 CDD:350780 74/190 (39%)
SEC63 1665..2015 CDD:214744 96/359 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54133
OrthoDB 1 1.010 - - D154891at2759
OrthoFinder 1 1.000 - - FOG0001085
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100305
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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