Sequence 1: | NP_648818.3 | Gene: | l(3)72Ab / 39737 | FlyBaseID: | FBgn0263599 | Length: | 2142 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001366952.1 | Gene: | snrp-200 / 174901 | WormBaseID: | WBGene00012896 | Length: | 2145 | Species: | Caenorhabditis elegans |
Alignment Length: | 2168 | Identity: | 1291/2168 - (59%) |
---|---|---|---|
Similarity: | 1678/2168 - (77%) | Gaps: | 49/2168 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGK-LDGTRMGDRYQRTKPEKT 64
Fly 65 EERKVKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFIQEALGDQPR 129
Fly 130 DILCGAADEILAVLKNDRLKDRERKKDIDSLLGAVTDERFALLVNLGKKITDFGSDAVNALTAAP 194
Fly 195 NNEEQIDETYGINVQFEESEEESDNDMYGEIRDDDAQDEGEEARIDHTLHAENLANEEAANNVKK 259
Fly 260 ERS-LHPLDIDAYWLQRCLSKFYKDAMVSQSKAADVLKILKDAADDRDCENQLVLLLGYDCFDFI 323
Fly 324 KQLKLNRQMVLYCTMLASAQTDSERQRIREKMRGNSALAKILRQLDTGKSEDQEEGEARGSKRGK 388
Fly 389 GDAEDGGAAA--------AGQVAGVRQLLELEEMAFTQGSHFMANKRCQLPDGSYRKQRKGYEEV 445
Fly 446 HVPALKPVPFDANEELQPVDKLPKYVQPVFEGFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKT 510
Fly 511 NVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQEMVGNFGRRLACYNLTVSELTGDHQL 575
Fly 576 TREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIE 640
Fly 641 TTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRFQVMN 705
Fly 706 EIVYEKTMEHAGRNQVLVFVHSRKETGKTARAVRDMCLEQDTLGSFLKEGSASMEVLRTEAEQVK 770
Fly 771 NTELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYN 835
Fly 836 PEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDM 900
Fly 901 LNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLE 965
Fly 966 RSGLIKYDRKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSLSSEFRHISVR 1030
Fly 1031 EEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSDMVFITQSAARLMRAI 1095
Fly 1096 FEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIAKKLEKKHFPWGRLYDLEPHE 1160
Fly 1161 LGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRGTLRVELTITPDFQWDEKVHGQSEGFWVLI 1225
Fly 1226 EDVDSELILHHEFFLLKQKYSQDEHQLKFFVPVFEPLPPQYFLRIVSDRWIGAETQLPVSFRHLI 1290
Fly 1291 LPEKNMPPTELLDLQPLPISALRQPKFESFYSQR-FPQFNPIQTQVFNAVYNSDENVFVGAPTGS 1354
Fly 1355 GKMTIAEFAIMRLFTTQSDARCVYLVSEEALADLVFADWHSKF-GSLDIKVVKLTGETGTDLKLI 1418
Fly 1419 AKGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVGGEEGPVLEIVCSRMRYISSQIEKQ 1483
Fly 1484 IRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQGYNVTHNATRIATMSKPVYNA 1548
Fly 1549 ILKYSAH---KPVIVFVSSRKQARLTAIDVLTYAASDLQPNRFFHAEEED--IKPFLERMTDKTL 1608
Fly 1609 KETLAQGVAYLHEGLSASDHRLVEQLFDSGAVQVAVISRDLCWGMSISAHLVIIMDTQFYNGKNH 1673
Fly 1674 SYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAE 1738
Fly 1739 VVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISV 1803
Fly 1804 EDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVRHHEEQVLR 1868
Fly 1869 TLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQILSKAIRLIQACVDV 1933
Fly 1934 LSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFSPEIVKRCTEKKIETVFDIMELEDEDRT 1998
Fly 1999 RLLQLSDLQMADVARFCNRYPNIELNYEVVDKDRINSGSTVNVVVQLEREDEVTG---PVIAPFF 2060
Fly 2061 PQKR-EEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKLDFVAPSPGKHDYTLYYMSDSYLGCDQEY 2124
Fly 2125 KFSIEV-----GDFQSESESESD 2142 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(3)72Ab | NP_648818.3 | BRR2 | 466..1241 | CDD:224125 | 553/774 (71%) |
DEAD | 482..661 | CDD:278688 | 123/178 (69%) | ||
HELICc | 773..859 | CDD:197757 | 76/85 (89%) | ||
Sec63 | 982..1285 | CDD:280962 | 203/302 (67%) | ||
DEXDc | 1320..1506 | CDD:214692 | 98/187 (52%) | ||
DEAD | 1329..1495 | CDD:278688 | 89/166 (54%) | ||
HELICc | 1615..1694 | CDD:197757 | 45/78 (58%) | ||
Sec63 | 1811..2127 | CDD:280962 | 176/319 (55%) | ||
snrp-200 | NP_001366952.1 | Helicase_PWI | 254..359 | CDD:407980 | 58/105 (55%) |
BRR2 | 438..1234 | CDD:224125 | 566/796 (71%) | ||
PRK00254 | 1313..>1878 | CDD:234702 | 321/564 (57%) | ||
DEXHc_Brr2_2 | 1319..1509 | CDD:350779 | 103/189 (54%) | ||
SEC63 | 1808..2127 | CDD:214744 | 178/324 (55%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 441 | 1.000 | Domainoid score | I276 |
eggNOG | 1 | 0.900 | - | - | E1_COG1204 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5859 | |
Inparanoid | 1 | 1.050 | 2586 | 1.000 | Inparanoid score | I7 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S560 |
OMA | 1 | 1.010 | - | - | QHG54133 | |
OrthoDB | 1 | 1.010 | - | - | D154891at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001085 | |
OrthoInspector | 1 | 1.000 | - | - | oto20742 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100305 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24075 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R148 |
SonicParanoid | 1 | 1.000 | - | - | X2806 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
17 | 16.820 |